Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 MTATP6P19-201ENST00000413797 659 ntBASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 AL353779.1-201ENST00000434793 351 ntBASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 AL589987.1-201ENST00000453380 819 ntBASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 AC026410.3-201ENST00000514280 936 ntBASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 TPRX2P-201ENST00000535362 881 ntBASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 AL049840.4-201ENST00000602422 811 ntBASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 AC107373.2-201ENST00000607735 490 ntBASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 AC018442.1-201ENST00000421439 2061 ntBASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 SSR1P1-201ENST00000407630 814 ntBASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 DOC2GP-202ENST00000514950 1163 ntBASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 AP005018.1-201ENST00000525475 301 ntBASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 AC140479.7-201ENST00000636301 2332 ntBASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NEUROD4Q9HD90 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 AL138799.1-201ENST00000448213 1675 ntBASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NEUROD4Q9HD90 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms