Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHD8Q9HCK8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 PCDHB19P-201ENST00000570871 2371 ntBASIC13.68□□□□□ -0.22
CHD8Q9HCK8 AL390961.4-201ENST00000623958 2535 ntBASIC13.68□□□□□ -0.22
CHD8Q9HCK8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 FKBP4P8-201ENST00000610931 1369 ntBASIC13.68□□□□□ -0.22
CHD8Q9HCK8 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 SNRPCP15-201ENST00000424055 192 ntBASIC13.68□□□□□ -0.22
CHD8Q9HCK8 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 RN7SL363P-201ENST00000482412 273 ntBASIC13.68□□□□□ -0.22
CHD8Q9HCK8 AC022447.5-201ENST00000504817 392 ntBASIC13.68□□□□□ -0.22
CHD8Q9HCK8 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 AC022001.3-201ENST00000606330 596 ntBASIC13.68□□□□□ -0.22
CHD8Q9HCK8 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.68□□□□□ -0.22
CHD8Q9HCK8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 MIR1226-201ENST00000408658 75 ntBASIC13.67□□□□□ -0.22
CHD8Q9HCK8 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 AC007881.1-201ENST00000437460 187 ntBASIC13.67□□□□□ -0.22
CHD8Q9HCK8 GOLGA6L16P-201ENST00000441780 1299 ntBASIC13.67□□□□□ -0.22
CHD8Q9HCK8 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 AP000920.1-201ENST00000531824 344 ntBASIC13.67□□□□□ -0.22
CHD8Q9HCK8 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 AC092364.2-201ENST00000596710 2692 ntBASIC13.67□□□□□ -0.22
CHD8Q9HCK8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 MIR645-201ENST00000385283 94 ntBASIC13.67□□□□□ -0.22
CHD8Q9HCK8 AC026884.1-201ENST00000418296 457 ntBASIC13.67□□□□□ -0.22
CHD8Q9HCK8 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.67□□□□□ -0.22
CHD8Q9HCK8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms