Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 AC036164.1-201ENST00000570544 333 ntBASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 MIR3197-201ENST00000582241 73 ntBASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 AC008738.7-201ENST00000609744 511 ntBASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 AL390754.1-201ENST00000619088 582 ntBASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 AC097359.2-201ENST00000604992 2389 ntBASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 GRK6P1-201ENST00000400595 1711 ntBASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 DRD5P1-201ENST00000456605 1438 ntBASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 CYMP-203ENST00000474680 1263 ntBASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 FAM86LP-201ENST00000478302 853 ntBASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 AC004840.1-201ENST00000636359 365 ntBASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 AC093525.8-201ENST00000624099 1342 ntBASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.6□□□□□ -0.07
LRTM1Q9HBL6 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 AP001267.2-201ENST00000532619 2086 ntBASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 HLA-K-203ENST00000430151 1046 ntBASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 AL353779.1-201ENST00000434793 351 ntBASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms