Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 ACKR1-201ENST00000368121 1240 ntBASIC14.48□□□□□ -0.09
BRF2Q9HAW0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 KLF2P2-201ENST00000416807 1039 ntBASIC14.48□□□□□ -0.09
BRF2Q9HAW0 AC098850.1-201ENST00000419919 790 ntBASIC14.48□□□□□ -0.09
BRF2Q9HAW0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 MYCLP2-201ENST00000449268 967 ntBASIC14.48□□□□□ -0.09
BRF2Q9HAW0 GIMAP3P-201ENST00000495150 836 ntBASIC14.48□□□□□ -0.09
BRF2Q9HAW0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
BRF2Q9HAW0 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 TPT1P11-201ENST00000458482 498 ntBASIC14.47□□□□□ -0.09
BRF2Q9HAW0 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.47□□□□□ -0.09
BRF2Q9HAW0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 AL096865.1-201ENST00000606796 927 ntBASIC14.47□□□□□ -0.09
BRF2Q9HAW0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms