Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 TUBB3P1-201ENST00000405796 1332 ntBASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 AC069120.2-201ENST00000524091 540 ntBASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 AC092337.1-201ENST00000568699 1129 ntBASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 GPX4-206ENST00000588919 803 ntTSL 2 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 Z92544.3-201ENST00000624747 417 ntBASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 R3HDM2P2-201ENST00000401880 2116 ntBASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SHANK2-AS3Q9BTD1 AL157414.3-201ENST00000624276 1954 ntBASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 KLF2P3-201ENST00000451977 1087 ntBASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 GAPDHP40-201ENST00000505218 1006 ntBASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 AC109322.1-201ENST00000524499 1264 ntBASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 AC027369.6-201ENST00000525520 931 ntBASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 BAD-207ENST00000544785 525 ntTSL 3 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.68□□□□□ -0.54
SHANK2-AS3Q9BTD1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms