Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
VGLL1Q99990 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
VGLL1Q99990 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.57□□□□□ -0.56
VGLL1Q99990 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC11.57□□□□□ -0.56
VGLL1Q99990 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
VGLL1Q99990 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
VGLL1Q99990 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
VGLL1Q99990 AC113367.3-201ENST00000508316 1912 ntBASIC11.56□□□□□ -0.56
VGLL1Q99990 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.56□□□□□ -0.56
VGLL1Q99990 AC018442.1-201ENST00000421439 2061 ntBASIC11.56□□□□□ -0.56
VGLL1Q99990 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.56□□□□□ -0.56
VGLL1Q99990 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC11.56□□□□□ -0.56
VGLL1Q99990 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.56□□□□□ -0.56
VGLL1Q99990 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
VGLL1Q99990 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.56□□□□□ -0.56
VGLL1Q99990 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
VGLL1Q99990 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
VGLL1Q99990 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
VGLL1Q99990 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC11.56□□□□□ -0.56
VGLL1Q99990 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC11.56□□□□□ -0.56
VGLL1Q99990 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.56□□□□□ -0.56
VGLL1Q99990 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.56□□□□□ -0.56
VGLL1Q99990 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 MIR4469-201ENST00000583919 79 ntBASIC11.56□□□□□ -0.56
VGLL1Q99990 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.56□□□□□ -0.56
VGLL1Q99990 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC11.56□□□□□ -0.56
VGLL1Q99990 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 MIR6080-201ENST00000617359 66 ntBASIC11.56□□□□□ -0.56
VGLL1Q99990 LINC00628-201ENST00000628516 1289 ntBASIC11.56□□□□□ -0.56
VGLL1Q99990 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
VGLL1Q99990 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
VGLL1Q99990 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 Z97205.2-201ENST00000564697 1639 ntBASIC11.56□□□□□ -0.56
VGLL1Q99990 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.56□□□□□ -0.56
VGLL1Q99990 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
VGLL1Q99990 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
VGLL1Q99990 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC11.56□□□□□ -0.56
VGLL1Q99990 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.56□□□□□ -0.56
VGLL1Q99990 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VGLL1Q99990 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.55□□□□□ -0.56
VGLL1Q99990 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VGLL1Q99990 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
VGLL1Q99990 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
VGLL1Q99990 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VGLL1Q99990 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VGLL1Q99990 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VGLL1Q99990 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
VGLL1Q99990 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
VGLL1Q99990 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VGLL1Q99990 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VGLL1Q99990 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VGLL1Q99990 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VGLL1Q99990 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.55□□□□□ -0.56
VGLL1Q99990 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
VGLL1Q99990 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
VGLL1Q99990 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.55□□□□□ -0.56
VGLL1Q99990 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.55□□□□□ -0.56
VGLL1Q99990 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VGLL1Q99990 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC11.55□□□□□ -0.56
VGLL1Q99990 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
VGLL1Q99990 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms