Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRRC46Q96FV0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LRRC46Q96FV0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRRC46Q96FV0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.77□□□□□ -0.2
LRRC46Q96FV0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 ACKR1-201ENST00000368121 1240 ntBASIC13.77□□□□□ -0.21
LRRC46Q96FV0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 AC012441.1-201ENST00000446669 685 ntBASIC13.77□□□□□ -0.21
LRRC46Q96FV0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 BNIP3P42-201ENST00000454982 569 ntBASIC13.77□□□□□ -0.21
LRRC46Q96FV0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 ALOX12P2-203ENST00000570921 1945 ntBASIC13.77□□□□□ -0.21
LRRC46Q96FV0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 BNIP3P29-201ENST00000598302 571 ntBASIC13.77□□□□□ -0.21
LRRC46Q96FV0 AC011447.5-201ENST00000616168 564 ntBASIC13.77□□□□□ -0.21
LRRC46Q96FV0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRC46Q96FV0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 AL133267.1-201ENST00000398220 340 ntBASIC13.76□□□□□ -0.21
LRRC46Q96FV0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 AC074338.1-201ENST00000416825 156 ntBASIC13.76□□□□□ -0.21
LRRC46Q96FV0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 AP001889.1-201ENST00000525414 633 ntBASIC13.76□□□□□ -0.21
LRRC46Q96FV0 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 SNX29P1-201ENST00000548357 1007 ntBASIC13.76□□□□□ -0.21
LRRC46Q96FV0 MIR4259-201ENST00000584466 101 ntBASIC13.76□□□□□ -0.21
LRRC46Q96FV0 AC000095.1-201ENST00000603208 874 ntBASIC13.76□□□□□ -0.21
LRRC46Q96FV0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRC46Q96FV0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms