Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DDX11Q96FC9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DDX11Q96FC9 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
DDX11Q96FC9 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DDX11Q96FC9 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX11Q96FC9 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX11Q96FC9 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX11Q96FC9 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.04■□□□□ 0.48
DDX11Q96FC9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DDX11Q96FC9 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.04■□□□□ 0.48
DDX11Q96FC9 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX11Q96FC9 KLF2P4-201ENST00000451959 1225 ntBASIC18.04■□□□□ 0.48
DDX11Q96FC9 CTBP2P5-201ENST00000454986 1264 ntBASIC18.04■□□□□ 0.48
DDX11Q96FC9 PTP4A1P2-201ENST00000546033 454 ntBASIC18.04■□□□□ 0.48
DDX11Q96FC9 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX11Q96FC9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.04■□□□□ 0.48
DDX11Q96FC9 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX11Q96FC9 AL033527.4-201ENST00000641026 673 ntBASIC18.04■□□□□ 0.48
DDX11Q96FC9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
DDX11Q96FC9 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DDX11Q96FC9 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
DDX11Q96FC9 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.04■□□□□ 0.48
DDX11Q96FC9 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX11Q96FC9 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX11Q96FC9 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX11Q96FC9 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC18.04■□□□□ 0.48
DDX11Q96FC9 USP28-214ENST00000545540 3431 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX11Q96FC9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX11Q96FC9 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 PDIA3P1-201ENST00000471856 1510 ntBASIC18.03■□□□□ 0.48
DDX11Q96FC9 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 BCRP2-202ENST00000447763 634 ntBASIC18.03■□□□□ 0.48
DDX11Q96FC9 BNIP3P42-201ENST00000454982 569 ntBASIC18.03■□□□□ 0.48
DDX11Q96FC9 BCRP6-201ENST00000510112 632 ntBASIC18.03■□□□□ 0.48
DDX11Q96FC9 BCRP7-201ENST00000511549 544 ntBASIC18.03■□□□□ 0.48
DDX11Q96FC9 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 BNIP3P29-201ENST00000598302 571 ntBASIC18.03■□□□□ 0.48
DDX11Q96FC9 AL049840.4-201ENST00000602422 811 ntBASIC18.03■□□□□ 0.48
DDX11Q96FC9 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 AC011447.5-201ENST00000616168 564 ntBASIC18.03■□□□□ 0.48
DDX11Q96FC9 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX11Q96FC9 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
DDX11Q96FC9 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
DDX11Q96FC9 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 ACE3P-201ENST00000423435 1973 ntBASIC18.02■□□□□ 0.48
DDX11Q96FC9 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 SNX18-202ENST00000343017 3140 ntBASIC18.02■□□□□ 0.48
DDX11Q96FC9 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
DDX11Q96FC9 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.02■□□□□ 0.48
DDX11Q96FC9 C1QBPP1-201ENST00000400117 770 ntBASIC18.02■□□□□ 0.48
DDX11Q96FC9 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.02■□□□□ 0.48
DDX11Q96FC9 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
DDX11Q96FC9 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.02■□□□□ 0.48
DDX11Q96FC9 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX11Q96FC9 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.02■□□□□ 0.48
DDX11Q96FC9 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.02■□□□□ 0.48
DDX11Q96FC9 FGD5P1-202ENST00000614866 2498 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms