Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.65□□□□□ -0.22
CPNE4Q96A23 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.65□□□□□ -0.22
CPNE4Q96A23 U91328.1-201ENST00000437528 223 ntBASIC13.65□□□□□ -0.22
CPNE4Q96A23 BCRP2-202ENST00000447763 634 ntBASIC13.65□□□□□ -0.22
CPNE4Q96A23 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.65□□□□□ -0.22
CPNE4Q96A23 BCRP6-201ENST00000510112 632 ntBASIC13.65□□□□□ -0.22
CPNE4Q96A23 BCRP7-201ENST00000511549 544 ntBASIC13.65□□□□□ -0.22
CPNE4Q96A23 AC022616.1-201ENST00000518688 554 ntBASIC13.65□□□□□ -0.22
CPNE4Q96A23 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CPNE4Q96A23 KRT17P8-201ENST00000540749 863 ntBASIC13.65□□□□□ -0.22
CPNE4Q96A23 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.65□□□□□ -0.22
CPNE4Q96A23 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE4Q96A23 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE4Q96A23 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE4Q96A23 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE4Q96A23 AC073347.1-201ENST00000421633 2643 ntBASIC13.65□□□□□ -0.22
CPNE4Q96A23 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE4Q96A23 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE4Q96A23 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CPNE4Q96A23 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CPNE4Q96A23 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.65□□□□□ -0.22
CPNE4Q96A23 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CPNE4Q96A23 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE4Q96A23 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE4Q96A23 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE4Q96A23 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.65□□□□□ -0.22
CPNE4Q96A23 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE4Q96A23 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 RAB43P1-201ENST00000561790 589 ntBASIC13.64□□□□□ -0.23
CPNE4Q96A23 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE4Q96A23 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE4Q96A23 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE4Q96A23 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.63□□□□□ -0.23
CPNE4Q96A23 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms