Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 NAA40-205ENST00000539656 577 ntTSL 4 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 BX088702.1-201ENST00000610784 235 ntBASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 RARS-210ENST00000626454 177 ntTSL 5 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 RN7SL147P-201ENST00000487345 298 ntBASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 RN7SL288P-201ENST00000490496 291 ntBASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 KLF17P1-201ENST00000547105 1126 ntBASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 RN7SL564P-201ENST00000496309 250 ntBASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 IGKV1OR-2-201ENST00000457995 350 ntBASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 ALG1L3P-201ENST00000503331 765 ntBASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 AL513523.2-202ENST00000427283 2040 ntBASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 AP000845.1-201ENST00000581677 2131 ntBASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 RPL3P5-201ENST00000441645 1232 ntBASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 VENTXP3-201ENST00000546480 773 ntBASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC9.84□□□□□ -0.83
ALMS1Q8TCU4 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 AL596257.1-201ENST00000641463 2694 ntBASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 MED11-202ENST00000573708 802 ntTSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 AC092127.1-201ENST00000567093 3455 ntBASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms