Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
ZNF439Q8NDP4 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 CICP24-201ENST00000605464 2705 ntBASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 AC104581.4-201ENST00000623126 3052 ntBASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 AC013726.1-201ENST00000563747 2285 ntBASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 REXO1L2P-201ENST00000425429 2069 ntBASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 ACE3P-201ENST00000423435 1973 ntBASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 AL512638.1-201ENST00000457493 794 ntBASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 AC093214.1-201ENST00000511688 1107 ntBASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 AJ011931.1-201ENST00000618749 2492 ntBASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF439Q8NDP4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 CICP4-201ENST00000447359 2812 ntBASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF439Q8NDP4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms