Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 AC008825.2-201ENST00000603374 718 ntBASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 AC005041.3-201ENST00000606287 649 ntBASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 AC087392.5-201ENST00000612517 489 ntBASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 AC092299.1-201ENST00000632679 757 ntBASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 CICP6-201ENST00000457191 2729 ntBASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CFAP43Q8NDM7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 EIF5AP2-201ENST00000585668 1047 ntBASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 AP001527.2-201ENST00000614441 631 ntBASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFAP43Q8NDM7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC23.02■■□□□ 1.27
CFAP43Q8NDM7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.27
CFAP43Q8NDM7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 RNA5SP359-201ENST00000364838 113 ntBASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 AC026320.2-201ENST00000434379 478 ntBASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 MIR3188-201ENST00000583494 85 ntBASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 AC092135.3-201ENST00000624151 1846 ntBASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CFAP43Q8NDM7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CFAP43Q8NDM7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CFAP43Q8NDM7 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CFAP43Q8NDM7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CFAP43Q8NDM7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CFAP43Q8NDM7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC23■■□□□ 1.27
CFAP43Q8NDM7 AC015909.3-201ENST00000572855 1794 ntBASIC23■■□□□ 1.27
CFAP43Q8NDM7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CFAP43Q8NDM7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
CFAP43Q8NDM7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CFAP43Q8NDM7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
CFAP43Q8NDM7 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms