Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 AC104457.1-201ENST00000401024 814 ntBASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 AL359711.2-201ENST00000563105 872 ntBASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 AC124283.3-201ENST00000570869 594 ntBASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 CICP11-201ENST00000434745 2827 ntBASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 CICP20-201ENST00000443330 2801 ntBASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.7□□□□□ -0.38
C11orf42Q8N5U0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 INTS4P2-202ENST00000614726 2019 ntBASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 AC134915.1-201ENST00000426461 574 ntBASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 RPL13AP25-201ENST00000484130 612 ntBASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 AL596325.1-201ENST00000563991 1082 ntBASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 AC105233.6-201ENST00000642093 218 ntBASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms