Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 AL121949.1-201ENST00000402043 968 ntBASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 AC004910.1-201ENST00000433493 787 ntBASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 HNRNPA1P10-201ENST00000444945 962 ntBASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 PRSS3P1-201ENST00000503996 742 ntBASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LTBP4Q8N2S1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 RN7SL480P-201ENST00000581481 294 ntBASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 AC145285.5-201ENST00000562217 361 ntBASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 CDC37P2-201ENST00000562287 1029 ntBASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 NAT9-204ENST00000578822 839 ntTSL 3 BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LTBP4Q8N2S1 AC117503.4-201ENST00000623229 1418 ntBASIC20.08■□□□□ 0.81
LTBP4Q8N2S1 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LTBP4Q8N2S1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LTBP4Q8N2S1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
LTBP4Q8N2S1 F10-203ENST00000409306 1450 ntTSL 3 BASIC20.08■□□□□ 0.81
LTBP4Q8N2S1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LTBP4Q8N2S1 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC20.08■□□□□ 0.81
LTBP4Q8N2S1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LTBP4Q8N2S1 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
LTBP4Q8N2S1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 AC073210.1-201ENST00000414799 232 ntBASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 RPSAP12-201ENST00000435879 888 ntBASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 RN7SKP155-201ENST00000516031 288 ntBASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.08■□□□□ 0.8
LTBP4Q8N2S1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LTBP4Q8N2S1 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LTBP4Q8N2S1 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
LTBP4Q8N2S1 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LTBP4Q8N2S1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms