Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 PCDHA3-202ENST00000532566 4594 ntBASIC16.48■□□□□ 0.23
VPS52Q8N1B4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 AC007969.1-201ENST00000433675 447 ntBASIC16.48■□□□□ 0.23
VPS52Q8N1B4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 AC006453.4-201ENST00000636949 1252 ntBASIC16.48■□□□□ 0.23
VPS52Q8N1B4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 AC022532.1-201ENST00000624563 1728 ntBASIC16.48■□□□□ 0.23
VPS52Q8N1B4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 RNU1-114P-201ENST00000365297 166 ntBASIC16.47■□□□□ 0.23
VPS52Q8N1B4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 KLF2P2-201ENST00000416807 1039 ntBASIC16.47■□□□□ 0.23
VPS52Q8N1B4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VPS52Q8N1B4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 ACTBP8-201ENST00000403258 1108 ntBASIC16.46■□□□□ 0.23
VPS52Q8N1B4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 AC114812.1-204ENST00000449669 728 ntBASIC16.46■□□□□ 0.23
VPS52Q8N1B4 HOMER2P2-201ENST00000451621 847 ntBASIC16.46■□□□□ 0.23
VPS52Q8N1B4 AL591846.1-201ENST00000451736 433 ntBASIC16.46■□□□□ 0.23
VPS52Q8N1B4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.46■□□□□ 0.23
VPS52Q8N1B4 AC025181.2-201ENST00000606994 802 ntBASIC16.46■□□□□ 0.23
VPS52Q8N1B4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 192.9 ms