Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL355864.2-201ENST00000447420 863 ntBASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 AC060766.1-201ENST00000590824 627 ntBASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 MIR6805-201ENST00000615055 62 ntBASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 AC103702.1-201ENST00000548801 2630 ntBASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 AC092933.1-201ENST00000393644 945 ntBASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 AC026434.2-201ENST00000506094 1078 ntBASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCUBE3Q8IX30 AC023824.1-201ENST00000562945 2975 ntBASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 AL138709.1-201ENST00000614840 1693 ntBASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 MIR1909-201ENST00000411312 80 ntBASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 ACA64.2-201ENST00000459014 129 ntBASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 MIR3908-201ENST00000579798 126 ntBASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 AL022328.1-201ENST00000610050 478 ntBASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 AC023090.2-201ENST00000625182 2110 ntBASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 CICP24-201ENST00000605464 2705 ntBASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms