Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 MIR4469-201ENST00000583919 79 ntBASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 AC091812.2-201ENST00000619081 385 ntBASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 AC134684.3-201ENST00000641758 218 ntBASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM42Q8IWZ5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM42Q8IWZ5 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.21■□□□□ 0.02
TRIM42Q8IWZ5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM42Q8IWZ5 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM42Q8IWZ5 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TRIM42Q8IWZ5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.21■□□□□ 0.02
TRIM42Q8IWZ5 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM42Q8IWZ5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 AL356585.2-201ENST00000625078 2396 ntBASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 AL133267.1-201ENST00000398220 340 ntBASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 AC004967.1-201ENST00000453589 447 ntBASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 COL6A4P2-202ENST00000504443 2753 ntBASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 DMBT1P1-203ENST00000636837 4628 ntBASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM42Q8IWZ5 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 ELL2P1-201ENST00000413990 1906 ntBASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRIM42Q8IWZ5 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms