Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 RPS23-204ENST00000507980 836 ntTSL 2 BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 AC003686.1-201ENST00000550956 1034 ntBASIC18.6■□□□□ 0.57
COL23A1Q86Y22 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 AP000322.3-201ENST00000608665 388 ntBASIC18.6■□□□□ 0.57
COL23A1Q86Y22 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 KRT17P5-201ENST00000332088 839 ntBASIC18.59■□□□□ 0.57
COL23A1Q86Y22 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 SALL4P5-201ENST00000419001 1760 ntBASIC18.59■□□□□ 0.57
COL23A1Q86Y22 CICP13-201ENST00000422015 2789 ntBASIC18.59■□□□□ 0.57
COL23A1Q86Y22 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
COL23A1Q86Y22 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC18.58■□□□□ 0.57
COL23A1Q86Y22 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL23A1Q86Y22 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC18.58■□□□□ 0.57
COL23A1Q86Y22 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL23A1Q86Y22 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC18.58■□□□□ 0.57
COL23A1Q86Y22 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
COL23A1Q86Y22 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL23A1Q86Y22 FAM90A21P-201ENST00000510875 1396 ntBASIC18.58■□□□□ 0.57
COL23A1Q86Y22 FAM90A15P-201ENST00000514465 1395 ntBASIC18.58■□□□□ 0.57
COL23A1Q86Y22 FAM90A6P-201ENST00000515148 1394 ntBASIC18.58■□□□□ 0.57
COL23A1Q86Y22 FAM90A16P-201ENST00000526662 1395 ntBASIC18.58■□□□□ 0.57
COL23A1Q86Y22 FAM90A9P-201ENST00000527940 1395 ntBASIC18.58■□□□□ 0.57
COL23A1Q86Y22 FAM90A5P-201ENST00000528738 1395 ntBASIC18.58■□□□□ 0.57
COL23A1Q86Y22 FAM90A14P-201ENST00000530386 1395 ntBASIC18.58■□□□□ 0.57
COL23A1Q86Y22 FAM90A13P-201ENST00000534703 1395 ntBASIC18.58■□□□□ 0.57
COL23A1Q86Y22 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL23A1Q86Y22 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL23A1Q86Y22 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL23A1Q86Y22 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL23A1Q86Y22 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL23A1Q86Y22 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 AC138701.2-201ENST00000553634 226 ntBASIC18.58■□□□□ 0.56
COL23A1Q86Y22 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL23A1Q86Y22 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms