Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 RN7SL602P-201ENST00000578326 324 ntBASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 AC139749.1-202ENST00000617529 3139 ntBASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 LRRC59-203ENST00000576448 1531 ntBASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 ACTBP8-201ENST00000403258 1108 ntBASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 AC106760.1-201ENST00000508690 800 ntBASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 AP001889.1-201ENST00000525414 633 ntBASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 SLC25A47P1-201ENST00000531577 414 ntBASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.24■□□□□ 0.03
LYSMD3Q7Z3D4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD3Q7Z3D4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms