Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC27Q2M243 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC27Q2M243 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CCDC27Q2M243 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC27Q2M243 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC27Q2M243 AMT-204ENST00000427987 1646 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC27Q2M243 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC27Q2M243 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC27Q2M243 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC27Q2M243 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CCDC27Q2M243 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC27Q2M243 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC27Q2M243 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC27Q2M243 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.59■□□□□ 0.73
CCDC27Q2M243 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC27Q2M243 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCDC27Q2M243 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CCDC27Q2M243 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC27Q2M243 RAB43P1-201ENST00000561790 589 ntBASIC19.59■□□□□ 0.73
CCDC27Q2M243 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CCDC27Q2M243 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CCDC27Q2M243 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC27Q2M243 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC27Q2M243 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC27Q2M243 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC27Q2M243 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC27Q2M243 AL354702.1-201ENST00000442006 1960 ntBASIC19.59■□□□□ 0.73
CCDC27Q2M243 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC27Q2M243 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC27Q2M243 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC27Q2M243 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC27Q2M243 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC27Q2M243 FAM45BP-202ENST00000592932 1624 ntBASIC19.58■□□□□ 0.73
CCDC27Q2M243 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC19.58■□□□□ 0.73
CCDC27Q2M243 RER1-203ENST00000378513 3000 ntTSL 3 BASIC19.58■□□□□ 0.73
CCDC27Q2M243 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CCDC27Q2M243 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CCDC27Q2M243 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC27Q2M243 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.73
CCDC27Q2M243 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC27Q2M243 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
CCDC27Q2M243 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC27Q2M243 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC27Q2M243 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC27Q2M243 AC004945.1-201ENST00000416738 983 ntBASIC19.58■□□□□ 0.72
CCDC27Q2M243 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC27Q2M243 FAM8A4P-201ENST00000435433 1213 ntBASIC19.58■□□□□ 0.72
CCDC27Q2M243 AC119751.2-201ENST00000504529 210 ntBASIC19.58■□□□□ 0.72
CCDC27Q2M243 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC27Q2M243 SNX29P1-201ENST00000548357 1007 ntBASIC19.58■□□□□ 0.72
CCDC27Q2M243 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCDC27Q2M243 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC27Q2M243 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC27Q2M243 AP001002.3-201ENST00000623482 206 ntBASIC19.58■□□□□ 0.72
CCDC27Q2M243 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC27Q2M243 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC27Q2M243 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC27Q2M243 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC27Q2M243 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CCDC27Q2M243 AC020910.5-201ENST00000623668 1865 ntBASIC19.58■□□□□ 0.72
CCDC27Q2M243 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC27Q2M243 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC27Q2M243 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC27Q2M243 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC27Q2M243 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC27Q2M243 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC27Q2M243 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC27Q2M243 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC27Q2M243 MPI-203ENST00000535694 1523 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC27Q2M243 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC27Q2M243 AC232323.1-201ENST00000540724 2099 ntBASIC19.57■□□□□ 0.72
CCDC27Q2M243 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC27Q2M243 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC27Q2M243 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC27Q2M243 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC27Q2M243 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC27Q2M243 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC27Q2M243 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 RN7SL713P-201ENST00000582127 302 ntBASIC19.57■□□□□ 0.72
CCDC27Q2M243 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC27Q2M243 AC073413.1-201ENST00000603927 732 ntBASIC19.57■□□□□ 0.72
CCDC27Q2M243 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC27Q2M243 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC27Q2M243 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms