Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC023310.3-201ENST00000557027 670 ntBASIC14.65□□□□□ -0.06
HMGCS1Q01581 AC100756.1-201ENST00000562736 682 ntBASIC14.65□□□□□ -0.06
HMGCS1Q01581 AC138749.3-201ENST00000567691 622 ntBASIC14.65□□□□□ -0.06
HMGCS1Q01581 AC036164.1-201ENST00000570544 333 ntBASIC14.65□□□□□ -0.06
HMGCS1Q01581 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 AC107373.2-201ENST00000607735 490 ntBASIC14.65□□□□□ -0.06
HMGCS1Q01581 AC116165.1-201ENST00000611806 668 ntBASIC14.65□□□□□ -0.06
HMGCS1Q01581 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 MRPS18AP1-201ENST00000414458 589 ntBASIC14.64□□□□□ -0.07
HMGCS1Q01581 AL512638.1-201ENST00000457493 794 ntBASIC14.64□□□□□ -0.07
HMGCS1Q01581 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 RNA5SP421-201ENST00000516864 134 ntBASIC14.64□□□□□ -0.07
HMGCS1Q01581 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 RARRES2P5-201ENST00000564013 466 ntBASIC14.64□□□□□ -0.07
HMGCS1Q01581 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 AL049840.4-201ENST00000602422 811 ntBASIC14.64□□□□□ -0.07
HMGCS1Q01581 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.64□□□□□ -0.07
HMGCS1Q01581 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.64□□□□□ -0.07
HMGCS1Q01581 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.64□□□□□ -0.07
HMGCS1Q01581 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.64□□□□□ -0.07
HMGCS1Q01581 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
HMGCS1Q01581 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCS1Q01581 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.64□□□□□ -0.07
HMGCS1Q01581 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCS1Q01581 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HMGCS1Q01581 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCS1Q01581 AL137783.1-201ENST00000623494 1896 ntBASIC14.63□□□□□ -0.07
HMGCS1Q01581 AL158070.2-201ENST00000623713 1621 ntBASIC14.63□□□□□ -0.07
HMGCS1Q01581 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGCS1Q01581 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGCS1Q01581 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCS1Q01581 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCS1Q01581 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCS1Q01581 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCS1Q01581 BX640514.1-201ENST00000583223 1918 ntBASIC14.63□□□□□ -0.07
HMGCS1Q01581 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCS1Q01581 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.63□□□□□ -0.07
HMGCS1Q01581 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCS1Q01581 HLA-K-203ENST00000430151 1046 ntBASIC14.63□□□□□ -0.07
HMGCS1Q01581 VDAC1P7-201ENST00000462417 847 ntBASIC14.63□□□□□ -0.07
HMGCS1Q01581 DOC2GP-202ENST00000514950 1163 ntBASIC14.63□□□□□ -0.07
HMGCS1Q01581 TPRX2P-201ENST00000535362 881 ntBASIC14.63□□□□□ -0.07
HMGCS1Q01581 AL662799.1-202ENST00000614205 422 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms