Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.98□□□□□ -0.01
SRP54P61011 CICP11-201ENST00000434745 2827 ntBASIC14.98□□□□□ -0.01
SRP54P61011 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.98□□□□□ -0.01
SRP54P61011 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
SRP54P61011 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SRP54P61011 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SRP54P61011 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.98□□□□□ -0.01
SRP54P61011 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SRP54P61011 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.98□□□□□ -0.01
SRP54P61011 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.98□□□□□ -0.01
SRP54P61011 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SRP54P61011 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SRP54P61011 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.97□□□□□ -0.01
SRP54P61011 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
SRP54P61011 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SRP54P61011 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SRP54P61011 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
SRP54P61011 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SRP54P61011 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SRP54P61011 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.97□□□□□ -0.01
SRP54P61011 AC245100.3-201ENST00000441281 285 ntBASIC14.97□□□□□ -0.01
SRP54P61011 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 AC108725.1-201ENST00000495472 409 ntBASIC14.97□□□□□ -0.01
SRP54P61011 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.97□□□□□ -0.01
SRP54P61011 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.97□□□□□ -0.01
SRP54P61011 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.97□□□□□ -0.01
SRP54P61011 MIR4741-201ENST00000579822 90 ntBASIC14.97□□□□□ -0.01
SRP54P61011 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.97□□□□□ -0.01
SRP54P61011 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.97□□□□□ -0.01
SRP54P61011 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.97□□□□□ -0.01
SRP54P61011 AC091271.1-201ENST00000611877 1162 ntBASIC14.97□□□□□ -0.01
SRP54P61011 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 AL603764.1-201ENST00000636452 321 ntBASIC14.97□□□□□ -0.01
SRP54P61011 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.97□□□□□ -0.01
SRP54P61011 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SRP54P61011 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
SRP54P61011 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SRP54P61011 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.97□□□□□ -0.01
SRP54P61011 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.97□□□□□ -0.01
SRP54P61011 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.97□□□□□ -0.01
SRP54P61011 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRP54P61011 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
SRP54P61011 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SRP54P61011 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 REXO1L5P-201ENST00000622260 2098 ntBASIC14.96□□□□□ -0.01
SRP54P61011 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.96□□□□□ -0.01
SRP54P61011 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.96□□□□□ -0.01
SRP54P61011 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.96□□□□□ -0.01
SRP54P61011 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.96□□□□□ -0.01
SRP54P61011 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.96□□□□□ -0.01
SRP54P61011 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SRP54P61011 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SRP54P61011 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SRP54P61011 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.96□□□□□ -0.01
SRP54P61011 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.96□□□□□ -0.01
SRP54P61011 HLA-K-203ENST00000430151 1046 ntBASIC14.96□□□□□ -0.01
SRP54P61011 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.96□□□□□ -0.01
SRP54P61011 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms