Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RIPK4P57078 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK4P57078 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC19.76■□□□□ 0.75
RIPK4P57078 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK4P57078 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK4P57078 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RIPK4P57078 AC020910.5-201ENST00000623668 1865 ntBASIC19.75■□□□□ 0.75
RIPK4P57078 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK4P57078 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC19.75■□□□□ 0.75
RIPK4P57078 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK4P57078 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
RIPK4P57078 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC19.75■□□□□ 0.75
RIPK4P57078 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK4P57078 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK4P57078 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.75■□□□□ 0.75
RIPK4P57078 FAM21FP-201ENST00000426241 1131 ntBASIC19.75■□□□□ 0.75
RIPK4P57078 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.75■□□□□ 0.75
RIPK4P57078 YBX1P6-201ENST00000442962 1002 ntBASIC19.75■□□□□ 0.75
RIPK4P57078 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RIPK4P57078 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK4P57078 COX5BP1-201ENST00000507622 393 ntBASIC19.75■□□□□ 0.75
RIPK4P57078 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
RIPK4P57078 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.75■□□□□ 0.75
RIPK4P57078 AC073413.1-201ENST00000603927 732 ntBASIC19.75■□□□□ 0.75
RIPK4P57078 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RIPK4P57078 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK4P57078 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK4P57078 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RIPK4P57078 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC19.75■□□□□ 0.75
RIPK4P57078 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK4P57078 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
RIPK4P57078 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RIPK4P57078 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK4P57078 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.75■□□□□ 0.75
RIPK4P57078 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK4P57078 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RIPK4P57078 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.75■□□□□ 0.75
RIPK4P57078 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK4P57078 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC19.75■□□□□ 0.75
RIPK4P57078 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK4P57078 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
RIPK4P57078 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK4P57078 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RIPK4P57078 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC19.74■□□□□ 0.75
RIPK4P57078 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 RN7SKP230-201ENST00000365642 335 ntBASIC19.74■□□□□ 0.75
RIPK4P57078 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.74■□□□□ 0.75
RIPK4P57078 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RIPK4P57078 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.74■□□□□ 0.75
RIPK4P57078 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC19.74■□□□□ 0.75
RIPK4P57078 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.74■□□□□ 0.75
RIPK4P57078 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.74■□□□□ 0.75
RIPK4P57078 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 AC009542.2-202ENST00000619004 1067 ntBASIC19.74■□□□□ 0.75
RIPK4P57078 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC19.74■□□□□ 0.75
RIPK4P57078 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RIPK4P57078 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RIPK4P57078 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC19.74■□□□□ 0.75
RIPK4P57078 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK4P57078 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RIPK4P57078 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK4P57078 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK4P57078 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK4P57078 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK4P57078 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK4P57078 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RIPK4P57078 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RIPK4P57078 AC011840.2-201ENST00000563063 1520 ntBASIC19.73■□□□□ 0.75
RIPK4P57078 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK4P57078 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK4P57078 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RIPK4P57078 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.73■□□□□ 0.75
RIPK4P57078 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK4P57078 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK4P57078 CNN2P10-201ENST00000443067 918 ntBASIC19.73■□□□□ 0.75
RIPK4P57078 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.73■□□□□ 0.75
RIPK4P57078 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK4P57078 RN7SL713P-201ENST00000582127 302 ntBASIC19.73■□□□□ 0.75
RIPK4P57078 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK4P57078 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK4P57078 AC010328.2-201ENST00000597698 1111 ntBASIC19.73■□□□□ 0.75
RIPK4P57078 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.73■□□□□ 0.75
RIPK4P57078 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms