Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
CDKN2DP55273 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
CDKN2DP55273 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.95□□□□□ -0.02
CDKN2DP55273 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.95□□□□□ -0.02
CDKN2DP55273 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.95□□□□□ -0.02
CDKN2DP55273 BCRP1-201ENST00000444246 691 ntBASIC14.95□□□□□ -0.02
CDKN2DP55273 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.95□□□□□ -0.02
CDKN2DP55273 ELK1P1-201ENST00000485699 580 ntBASIC14.95□□□□□ -0.02
CDKN2DP55273 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.95□□□□□ -0.02
CDKN2DP55273 AC026434.2-201ENST00000506094 1078 ntBASIC14.95□□□□□ -0.02
CDKN2DP55273 API5-211ENST00000534695 560 ntTSL 5 BASIC14.95□□□□□ -0.02
CDKN2DP55273 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.95□□□□□ -0.02
CDKN2DP55273 RN7SL204P-201ENST00000582831 262 ntBASIC14.95□□□□□ -0.02
CDKN2DP55273 LINC02560-201ENST00000596379 459 ntBASIC14.95□□□□□ -0.02
CDKN2DP55273 TMEM261P1-201ENST00000604899 340 ntBASIC14.95□□□□□ -0.02
CDKN2DP55273 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CDKN2DP55273 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.95□□□□□ -0.02
CDKN2DP55273 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CDKN2DP55273 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.95□□□□□ -0.02
CDKN2DP55273 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.95□□□□□ -0.02
CDKN2DP55273 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 AL391825.1-201ENST00000457671 1364 ntBASIC14.95□□□□□ -0.02
CDKN2DP55273 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CDKN2DP55273 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.94□□□□□ -0.02
CDKN2DP55273 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDKN2DP55273 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.94□□□□□ -0.02
CDKN2DP55273 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CDKN2DP55273 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.94□□□□□ -0.02
CDKN2DP55273 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
CDKN2DP55273 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.94□□□□□ -0.02
CDKN2DP55273 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.94□□□□□ -0.02
CDKN2DP55273 KLF2P2-201ENST00000416807 1039 ntBASIC14.94□□□□□ -0.02
CDKN2DP55273 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.94□□□□□ -0.02
CDKN2DP55273 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CDKN2DP55273 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.94□□□□□ -0.02
CDKN2DP55273 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CDKN2DP55273 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.94□□□□□ -0.02
CDKN2DP55273 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CDKN2DP55273 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.94□□□□□ -0.02
CDKN2DP55273 CTBP2P3-201ENST00000585629 1255 ntBASIC14.94□□□□□ -0.02
CDKN2DP55273 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.94□□□□□ -0.02
CDKN2DP55273 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
CDKN2DP55273 AC005252.2-201ENST00000624630 1141 ntBASIC14.94□□□□□ -0.02
CDKN2DP55273 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CDKN2DP55273 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDKN2DP55273 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.94□□□□□ -0.02
CDKN2DP55273 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.94□□□□□ -0.02
CDKN2DP55273 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CDKN2DP55273 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKN2DP55273 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKN2DP55273 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.93□□□□□ -0.02
CDKN2DP55273 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKN2DP55273 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.93□□□□□ -0.02
CDKN2DP55273 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKN2DP55273 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CDKN2DP55273 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.93□□□□□ -0.02
CDKN2DP55273 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms