Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1LP55160 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1LP55160 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.52■□□□□ 0.24
NCKAP1LP55160 AC026954.1-201ENST00000429771 1293 ntBASIC16.52■□□□□ 0.24
NCKAP1LP55160 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.52■□□□□ 0.24
NCKAP1LP55160 AC007969.1-201ENST00000433675 447 ntBASIC16.52■□□□□ 0.24
NCKAP1LP55160 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NCKAP1LP55160 ATP5G2P4-201ENST00000442175 420 ntBASIC16.52■□□□□ 0.24
NCKAP1LP55160 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.52■□□□□ 0.24
NCKAP1LP55160 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.52■□□□□ 0.24
NCKAP1LP55160 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.52■□□□□ 0.24
NCKAP1LP55160 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.52■□□□□ 0.24
NCKAP1LP55160 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.52■□□□□ 0.24
NCKAP1LP55160 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.52■□□□□ 0.24
NCKAP1LP55160 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1LP55160 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.52■□□□□ 0.24
NCKAP1LP55160 AP005482.1-201ENST00000563722 1273 ntBASIC16.52■□□□□ 0.24
NCKAP1LP55160 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1LP55160 MIR4259-201ENST00000584466 101 ntBASIC16.52■□□□□ 0.24
NCKAP1LP55160 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.52■□□□□ 0.24
NCKAP1LP55160 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.52■□□□□ 0.24
NCKAP1LP55160 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
NCKAP1LP55160 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1LP55160 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NCKAP1LP55160 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
NCKAP1LP55160 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NCKAP1LP55160 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCKAP1LP55160 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCKAP1LP55160 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.52■□□□□ 0.23
NCKAP1LP55160 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCKAP1LP55160 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.52■□□□□ 0.23
NCKAP1LP55160 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 AC011840.2-201ENST00000563063 1520 ntBASIC16.51■□□□□ 0.23
NCKAP1LP55160 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 FAM8A4P-201ENST00000435433 1213 ntBASIC16.51■□□□□ 0.23
NCKAP1LP55160 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 AC079316.1-201ENST00000548397 411 ntBASIC16.51■□□□□ 0.23
NCKAP1LP55160 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 C2orf69P2-201ENST00000562032 1123 ntBASIC16.51■□□□□ 0.23
NCKAP1LP55160 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 COX11-210ENST00000639671 696 ntBASIC16.51■□□□□ 0.23
NCKAP1LP55160 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.51■□□□□ 0.23
NCKAP1LP55160 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 AP000593.2-201ENST00000542775 1433 ntBASIC16.51■□□□□ 0.23
NCKAP1LP55160 CICP23-201ENST00000605013 2741 ntBASIC16.51■□□□□ 0.23
NCKAP1LP55160 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1LP55160 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NCKAP1LP55160 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NCKAP1LP55160 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCKAP1LP55160 AL354989.2-201ENST00000435838 1540 ntBASIC16.5■□□□□ 0.23
NCKAP1LP55160 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCKAP1LP55160 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.5■□□□□ 0.23
NCKAP1LP55160 INE2-201ENST00000630399 1874 ntBASIC16.5■□□□□ 0.23
NCKAP1LP55160 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCKAP1LP55160 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.5■□□□□ 0.23
NCKAP1LP55160 FKBP4P6-201ENST00000457486 1332 ntBASIC16.5■□□□□ 0.23
NCKAP1LP55160 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCKAP1LP55160 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
NCKAP1LP55160 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NCKAP1LP55160 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCKAP1LP55160 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.5■□□□□ 0.23
NCKAP1LP55160 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
NCKAP1LP55160 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
NCKAP1LP55160 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCKAP1LP55160 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms