Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
EFNA4P52798 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNA4P52798 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNA4P52798 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNA4P52798 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNA4P52798 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.65□□□□□ -0.39
EFNA4P52798 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.39
EFNA4P52798 AL365203.3-201ENST00000609742 2057 ntBASIC12.65□□□□□ -0.39
EFNA4P52798 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
EFNA4P52798 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.65□□□□□ -0.39
EFNA4P52798 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
EFNA4P52798 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNA4P52798 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNA4P52798 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNA4P52798 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.64□□□□□ -0.39
EFNA4P52798 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
EFNA4P52798 AC087481.3-201ENST00000602886 1894 ntBASIC12.64□□□□□ -0.39
EFNA4P52798 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.64□□□□□ -0.39
EFNA4P52798 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.64□□□□□ -0.39
EFNA4P52798 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.64□□□□□ -0.39
EFNA4P52798 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
EFNA4P52798 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 AC092506.1-202ENST00000401022 528 ntBASIC12.64□□□□□ -0.39
EFNA4P52798 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNA4P52798 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNA4P52798 FAM58BP-201ENST00000439056 645 ntBASIC12.64□□□□□ -0.39
EFNA4P52798 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.64□□□□□ -0.39
EFNA4P52798 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNA4P52798 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNA4P52798 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.64□□□□□ -0.39
EFNA4P52798 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.64□□□□□ -0.39
EFNA4P52798 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.64□□□□□ -0.39
EFNA4P52798 MIR3619-201ENST00000579667 83 ntBASIC12.64□□□□□ -0.39
EFNA4P52798 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNA4P52798 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.64□□□□□ -0.39
EFNA4P52798 AL358472.3-201ENST00000608147 415 ntBASIC12.64□□□□□ -0.39
EFNA4P52798 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.64□□□□□ -0.39
EFNA4P52798 AL136295.7-201ENST00000619226 1200 ntBASIC12.64□□□□□ -0.39
EFNA4P52798 AC091544.8-201ENST00000619490 361 ntBASIC12.64□□□□□ -0.39
EFNA4P52798 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
EFNA4P52798 AC138627.1-207ENST00000641560 1006 ntBASIC12.64□□□□□ -0.39
EFNA4P52798 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
EFNA4P52798 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNA4P52798 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNA4P52798 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
EFNA4P52798 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
EFNA4P52798 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.64□□□□□ -0.39
EFNA4P52798 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNA4P52798 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
EFNA4P52798 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
EFNA4P52798 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
EFNA4P52798 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EFNA4P52798 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNA4P52798 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.63□□□□□ -0.39
EFNA4P52798 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNA4P52798 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EFNA4P52798 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNA4P52798 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNA4P52798 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
EFNA4P52798 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNA4P52798 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNA4P52798 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNA4P52798 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNA4P52798 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNA4P52798 DPM3-202ENST00000368399 517 ntBASIC12.63□□□□□ -0.39
EFNA4P52798 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNA4P52798 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
EFNA4P52798 AL133466.1-201ENST00000447582 150 ntBASIC12.63□□□□□ -0.39
EFNA4P52798 RNMTL1P1-201ENST00000454103 560 ntBASIC12.63□□□□□ -0.39
EFNA4P52798 UPF3AP2-201ENST00000457924 1132 ntBASIC12.63□□□□□ -0.39
EFNA4P52798 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.63□□□□□ -0.39
EFNA4P52798 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
EFNA4P52798 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.63□□□□□ -0.39
EFNA4P52798 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.63□□□□□ -0.39
EFNA4P52798 AC013355.1-201ENST00000562625 723 ntBASIC12.63□□□□□ -0.39
EFNA4P52798 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.63□□□□□ -0.39
EFNA4P52798 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.63□□□□□ -0.39
EFNA4P52798 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms