Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
EFNA3P52797 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.16□□□□□ -0.14
EFNA3P52797 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
EFNA3P52797 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.16□□□□□ -0.14
EFNA3P52797 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.16□□□□□ -0.14
EFNA3P52797 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
EFNA3P52797 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
EFNA3P52797 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
EFNA3P52797 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
EFNA3P52797 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.16□□□□□ -0.14
EFNA3P52797 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 TPM3P8-201ENST00000330554 643 ntBASIC14.16□□□□□ -0.14
EFNA3P52797 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.16□□□□□ -0.14
EFNA3P52797 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
EFNA3P52797 CD8B2-202ENST00000417670 633 ntBASIC14.16□□□□□ -0.14
EFNA3P52797 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.16□□□□□ -0.14
EFNA3P52797 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.16□□□□□ -0.14
EFNA3P52797 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
EFNA3P52797 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
EFNA3P52797 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.16□□□□□ -0.14
EFNA3P52797 AC079316.1-201ENST00000548397 411 ntBASIC14.16□□□□□ -0.14
EFNA3P52797 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.16□□□□□ -0.14
EFNA3P52797 AC106820.3-201ENST00000561653 397 ntBASIC14.16□□□□□ -0.14
EFNA3P52797 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 AC073413.1-201ENST00000603927 732 ntBASIC14.16□□□□□ -0.14
EFNA3P52797 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.16□□□□□ -0.14
EFNA3P52797 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.16□□□□□ -0.14
EFNA3P52797 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
EFNA3P52797 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
EFNA3P52797 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.16□□□□□ -0.14
EFNA3P52797 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
EFNA3P52797 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNA3P52797 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
EFNA3P52797 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.16□□□□□ -0.14
EFNA3P52797 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
EFNA3P52797 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.16□□□□□ -0.14
EFNA3P52797 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.16□□□□□ -0.14
EFNA3P52797 TUBB1P2-201ENST00000422712 1306 ntBASIC14.15□□□□□ -0.14
EFNA3P52797 TUBB1P1-201ENST00000503144 1300 ntBASIC14.15□□□□□ -0.14
EFNA3P52797 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.15□□□□□ -0.14
EFNA3P52797 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.15□□□□□ -0.14
EFNA3P52797 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.15□□□□□ -0.14
EFNA3P52797 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
EFNA3P52797 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.15□□□□□ -0.14
EFNA3P52797 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.15□□□□□ -0.14
EFNA3P52797 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
EFNA3P52797 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.15□□□□□ -0.14
EFNA3P52797 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.15□□□□□ -0.14
EFNA3P52797 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNA3P52797 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.15□□□□□ -0.14
EFNA3P52797 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
EFNA3P52797 FAM21FP-201ENST00000426241 1131 ntBASIC14.15□□□□□ -0.14
EFNA3P52797 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.15□□□□□ -0.14
EFNA3P52797 YBX1P6-201ENST00000442962 1002 ntBASIC14.15□□□□□ -0.14
EFNA3P52797 CNN2P10-201ENST00000443067 918 ntBASIC14.15□□□□□ -0.14
EFNA3P52797 AL355994.2-201ENST00000447882 704 ntBASIC14.15□□□□□ -0.14
EFNA3P52797 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
EFNA3P52797 FAM86HP-204ENST00000513466 959 ntBASIC14.15□□□□□ -0.14
EFNA3P52797 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
EFNA3P52797 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms