Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.78■□□□□ 0.44
MRE11P49959 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
MRE11P49959 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC17.78■□□□□ 0.44
MRE11P49959 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
MRE11P49959 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
MRE11P49959 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.78■□□□□ 0.44
MRE11P49959 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.78■□□□□ 0.44
MRE11P49959 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.78■□□□□ 0.44
MRE11P49959 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.78■□□□□ 0.44
MRE11P49959 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
MRE11P49959 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC17.78■□□□□ 0.44
MRE11P49959 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
MRE11P49959 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17.78■□□□□ 0.44
MRE11P49959 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
MRE11P49959 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.78■□□□□ 0.44
MRE11P49959 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MRE11P49959 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.78■□□□□ 0.44
MRE11P49959 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
MRE11P49959 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.78■□□□□ 0.44
MRE11P49959 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRE11P49959 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRE11P49959 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC17.77■□□□□ 0.44
MRE11P49959 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
MRE11P49959 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRE11P49959 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MRE11P49959 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MRE11P49959 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRE11P49959 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
MRE11P49959 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17.77■□□□□ 0.44
MRE11P49959 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRE11P49959 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRE11P49959 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRE11P49959 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRE11P49959 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC17.77■□□□□ 0.44
MRE11P49959 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.77■□□□□ 0.44
MRE11P49959 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRE11P49959 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
MRE11P49959 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRE11P49959 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.44
MRE11P49959 MIR943-201ENST00000401286 94 ntBASIC17.77■□□□□ 0.44
MRE11P49959 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRE11P49959 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
MRE11P49959 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.77■□□□□ 0.44
MRE11P49959 RPS2P32-201ENST00000439199 892 ntBASIC17.77■□□□□ 0.44
MRE11P49959 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.77■□□□□ 0.44
MRE11P49959 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.77■□□□□ 0.44
MRE11P49959 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MRE11P49959 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
MRE11P49959 AC022145.2-201ENST00000598203 171 ntBASIC17.77■□□□□ 0.44
MRE11P49959 AL022326.1-202ENST00000641533 845 ntBASIC17.77■□□□□ 0.44
MRE11P49959 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.77■□□□□ 0.44
MRE11P49959 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRE11P49959 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MRE11P49959 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
MRE11P49959 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MRE11P49959 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
MRE11P49959 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
MRE11P49959 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.77■□□□□ 0.43
MRE11P49959 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.77■□□□□ 0.43
MRE11P49959 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.77■□□□□ 0.43
MRE11P49959 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.77■□□□□ 0.43
MRE11P49959 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.77■□□□□ 0.43
MRE11P49959 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MRE11P49959 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
MRE11P49959 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
MRE11P49959 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MRE11P49959 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
MRE11P49959 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC17.76■□□□□ 0.43
MRE11P49959 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
MRE11P49959 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC17.76■□□□□ 0.43
MRE11P49959 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 U91328.1-201ENST00000437528 223 ntBASIC17.76■□□□□ 0.43
MRE11P49959 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.76■□□□□ 0.43
MRE11P49959 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.76■□□□□ 0.43
MRE11P49959 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.76■□□□□ 0.43
MRE11P49959 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.76■□□□□ 0.43
MRE11P49959 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRE11P49959 AC091812.2-201ENST00000619081 385 ntBASIC17.76■□□□□ 0.43
MRE11P49959 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.76■□□□□ 0.43
MRE11P49959 AC004877.2-201ENST00000623941 599 ntBASIC17.76■□□□□ 0.43
MRE11P49959 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.76■□□□□ 0.43
MRE11P49959 AC068587.10-201ENST00000641210 219 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms