Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.71□□□□□ -0.21
APOBEC1P41238 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOBEC1P41238 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOBEC1P41238 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
APOBEC1P41238 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOBEC1P41238 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
APOBEC1P41238 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOBEC1P41238 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOBEC1P41238 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.71□□□□□ -0.22
APOBEC1P41238 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOBEC1P41238 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.71□□□□□ -0.22
APOBEC1P41238 AC055811.4-201ENST00000624039 1754 ntBASIC13.71□□□□□ -0.22
APOBEC1P41238 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOBEC1P41238 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.7□□□□□ -0.22
APOBEC1P41238 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.7□□□□□ -0.22
APOBEC1P41238 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
APOBEC1P41238 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.7□□□□□ -0.22
APOBEC1P41238 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.7□□□□□ -0.22
APOBEC1P41238 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
APOBEC1P41238 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.7□□□□□ -0.22
APOBEC1P41238 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.7□□□□□ -0.22
APOBEC1P41238 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.7□□□□□ -0.22
APOBEC1P41238 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.7□□□□□ -0.22
APOBEC1P41238 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.7□□□□□ -0.22
APOBEC1P41238 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.7□□□□□ -0.22
APOBEC1P41238 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.7□□□□□ -0.22
APOBEC1P41238 RN7SL837P-201ENST00000463010 287 ntBASIC13.7□□□□□ -0.22
APOBEC1P41238 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.7□□□□□ -0.22
APOBEC1P41238 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.7□□□□□ -0.22
APOBEC1P41238 AP005018.1-201ENST00000525475 301 ntBASIC13.7□□□□□ -0.22
APOBEC1P41238 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.7□□□□□ -0.22
APOBEC1P41238 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.7□□□□□ -0.22
APOBEC1P41238 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
APOBEC1P41238 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.7□□□□□ -0.22
APOBEC1P41238 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.7□□□□□ -0.22
APOBEC1P41238 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
APOBEC1P41238 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
APOBEC1P41238 OR2I1P-210ENST00000642037 4691 ntBASIC13.7□□□□□ -0.22
APOBEC1P41238 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
APOBEC1P41238 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC1P41238 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOBEC1P41238 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOBEC1P41238 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOBEC1P41238 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
APOBEC1P41238 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOBEC1P41238 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOBEC1P41238 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
APOBEC1P41238 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOBEC1P41238 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOBEC1P41238 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.69□□□□□ -0.22
APOBEC1P41238 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.69□□□□□ -0.22
APOBEC1P41238 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOBEC1P41238 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOBEC1P41238 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.69□□□□□ -0.22
APOBEC1P41238 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOBEC1P41238 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOBEC1P41238 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOBEC1P41238 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
APOBEC1P41238 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.69□□□□□ -0.22
APOBEC1P41238 AL512384.1-201ENST00000406683 331 ntBASIC13.69□□□□□ -0.22
APOBEC1P41238 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.69□□□□□ -0.22
APOBEC1P41238 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.69□□□□□ -0.22
APOBEC1P41238 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOBEC1P41238 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
APOBEC1P41238 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.69□□□□□ -0.22
APOBEC1P41238 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.69□□□□□ -0.22
APOBEC1P41238 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOBEC1P41238 EIF3FP3-201ENST00000434851 1086 ntBASIC13.69□□□□□ -0.22
APOBEC1P41238 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.69□□□□□ -0.22
APOBEC1P41238 AL355864.2-201ENST00000447420 863 ntBASIC13.69□□□□□ -0.22
APOBEC1P41238 COX20P2-201ENST00000452636 358 ntBASIC13.69□□□□□ -0.22
APOBEC1P41238 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOBEC1P41238 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms