Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.43■□□□□ 0.54
TM4SF1P30408 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.43■□□□□ 0.54
TM4SF1P30408 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC18.42■□□□□ 0.54
TM4SF1P30408 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.42■□□□□ 0.54
TM4SF1P30408 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TM4SF1P30408 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC18.42■□□□□ 0.54
TM4SF1P30408 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.42■□□□□ 0.54
TM4SF1P30408 AL354861.1-201ENST00000445213 355 ntBASIC18.42■□□□□ 0.54
TM4SF1P30408 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC18.42■□□□□ 0.54
TM4SF1P30408 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC18.42■□□□□ 0.54
TM4SF1P30408 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.42■□□□□ 0.54
TM4SF1P30408 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC18.42■□□□□ 0.54
TM4SF1P30408 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.42■□□□□ 0.54
TM4SF1P30408 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TM4SF1P30408 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.42■□□□□ 0.54
TM4SF1P30408 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
TM4SF1P30408 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TM4SF1P30408 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TM4SF1P30408 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TM4SF1P30408 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.42■□□□□ 0.54
TM4SF1P30408 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC18.42■□□□□ 0.54
TM4SF1P30408 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF1P30408 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF1P30408 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TM4SF1P30408 AC112693.3-201ENST00000624819 1983 ntBASIC18.41■□□□□ 0.54
TM4SF1P30408 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.41■□□□□ 0.54
TM4SF1P30408 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF1P30408 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.41■□□□□ 0.54
TM4SF1P30408 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF1P30408 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF1P30408 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TM4SF1P30408 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF1P30408 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF1P30408 AC092638.2-201ENST00000441105 947 ntBASIC18.41■□□□□ 0.54
TM4SF1P30408 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.41■□□□□ 0.54
TM4SF1P30408 DUX4L50-201ENST00000455245 715 ntBASIC18.41■□□□□ 0.54
TM4SF1P30408 AC026410.1-201ENST00000507366 1101 ntBASIC18.41■□□□□ 0.54
TM4SF1P30408 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.41■□□□□ 0.54
TM4SF1P30408 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF1P30408 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.41■□□□□ 0.54
TM4SF1P30408 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF1P30408 MIR5196-201ENST00000578146 115 ntBASIC18.41■□□□□ 0.54
TM4SF1P30408 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC18.41■□□□□ 0.54
TM4SF1P30408 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC18.41■□□□□ 0.54
TM4SF1P30408 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC18.41■□□□□ 0.54
TM4SF1P30408 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
TM4SF1P30408 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF1P30408 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.41■□□□□ 0.54
TM4SF1P30408 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.41■□□□□ 0.54
TM4SF1P30408 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF1P30408 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF1P30408 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF1P30408 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.41■□□□□ 0.54
TM4SF1P30408 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TM4SF1P30408 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF1P30408 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF1P30408 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF1P30408 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF1P30408 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF1P30408 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TM4SF1P30408 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF1P30408 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF1P30408 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC18.4■□□□□ 0.54
TM4SF1P30408 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC18.4■□□□□ 0.54
TM4SF1P30408 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC18.4■□□□□ 0.54
TM4SF1P30408 NEU3-207ENST00000534628 746 ntTSL 2 BASIC18.4■□□□□ 0.54
TM4SF1P30408 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC18.4■□□□□ 0.54
TM4SF1P30408 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC18.4■□□□□ 0.54
TM4SF1P30408 MT3-203ENST00000565838 421 ntTSL 3 BASIC18.4■□□□□ 0.54
TM4SF1P30408 NUDT4P2-201ENST00000578341 546 ntBASIC18.4■□□□□ 0.54
TM4SF1P30408 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.4■□□□□ 0.54
TM4SF1P30408 AL022334.2-201ENST00000610000 484 ntBASIC18.4■□□□□ 0.54
TM4SF1P30408 FO393412.1-201ENST00000619841 382 ntBASIC18.4■□□□□ 0.54
TM4SF1P30408 LINC00431-202ENST00000636375 159 ntBASIC18.4■□□□□ 0.54
TM4SF1P30408 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF1P30408 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TM4SF1P30408 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC18.4■□□□□ 0.54
TM4SF1P30408 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF1P30408 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF1P30408 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF1P30408 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TM4SF1P30408 LINC01815-202ENST00000641468 1409 ntBASIC18.4■□□□□ 0.54
TM4SF1P30408 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms