Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH1P12830 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDH1P12830 TMEM261P1-201ENST00000604899 340 ntBASIC14.82□□□□□ -0.04
CDH1P12830 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH1P12830 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDH1P12830 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDH1P12830 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 WASH3P-207ENST00000560956 1394 ntBASIC14.82□□□□□ -0.04
CDH1P12830 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDH1P12830 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CDH1P12830 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH1P12830 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH1P12830 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 AP000845.1-201ENST00000581677 2131 ntBASIC14.81□□□□□ -0.04
CDH1P12830 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDH1P12830 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH1P12830 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CDH1P12830 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH1P12830 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDH1P12830 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.81□□□□□ -0.04
CDH1P12830 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH1P12830 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.81□□□□□ -0.04
CDH1P12830 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.81□□□□□ -0.04
CDH1P12830 TP53TG3HP-202ENST00000569755 579 ntBASIC14.81□□□□□ -0.04
CDH1P12830 AC124283.3-201ENST00000570869 594 ntBASIC14.81□□□□□ -0.04
CDH1P12830 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH1P12830 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.81□□□□□ -0.04
CDH1P12830 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH1P12830 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CDH1P12830 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDH1P12830 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CDH1P12830 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH1P12830 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 AC012508.2-201ENST00000567613 1472 ntBASIC14.81□□□□□ -0.04
CDH1P12830 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH1P12830 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH1P12830 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH1P12830 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CDH1P12830 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH1P12830 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH1P12830 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH1P12830 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH1P12830 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH1P12830 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH1P12830 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH1P12830 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH1P12830 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH1P12830 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH1P12830 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH1P12830 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH1P12830 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH1P12830 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH1P12830 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH1P12830 SOCS2P1-201ENST00000417727 557 ntBASIC14.8□□□□□ -0.04
CDH1P12830 SPDYE22P-201ENST00000582158 798 ntBASIC14.8□□□□□ -0.04
CDH1P12830 AC093813.1-201ENST00000605066 256 ntBASIC14.8□□□□□ -0.04
CDH1P12830 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH1P12830 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH1P12830 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH1P12830 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH1P12830 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH1P12830 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms