Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXC6P09630 RPSAP31-201ENST00000416648 895 ntBASIC16.92■□□□□ 0.3
HOXC6P09630 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.92■□□□□ 0.3
HOXC6P09630 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC6P09630 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HOXC6P09630 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HOXC6P09630 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.92■□□□□ 0.3
HOXC6P09630 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC6P09630 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXC6P09630 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.92■□□□□ 0.3
HOXC6P09630 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HOXC6P09630 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC6P09630 CICP11-201ENST00000434745 2827 ntBASIC16.92■□□□□ 0.3
HOXC6P09630 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC6P09630 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC6P09630 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXC6P09630 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC6P09630 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
HOXC6P09630 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC6P09630 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXC6P09630 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HOXC6P09630 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HOXC6P09630 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC6P09630 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC6P09630 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC6P09630 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HOXC6P09630 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC6P09630 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC6P09630 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.91■□□□□ 0.3
HOXC6P09630 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.91■□□□□ 0.3
HOXC6P09630 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXC6P09630 MIR6720-201ENST00000611664 98 ntBASIC16.91■□□□□ 0.3
HOXC6P09630 RN7SL736P-201ENST00000613111 269 ntBASIC16.91■□□□□ 0.3
HOXC6P09630 AL805961.1-201ENST00000642026 753 ntBASIC16.91■□□□□ 0.3
HOXC6P09630 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXC6P09630 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC6P09630 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXC6P09630 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HOXC6P09630 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC6P09630 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC6P09630 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC6P09630 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HOXC6P09630 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HOXC6P09630 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC6P09630 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HOXC6P09630 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC6P09630 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC6P09630 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXC6P09630 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXC6P09630 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HOXC6P09630 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
HOXC6P09630 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXC6P09630 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.9■□□□□ 0.3
HOXC6P09630 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HOXC6P09630 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.9■□□□□ 0.3
HOXC6P09630 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXC6P09630 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXC6P09630 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HOXC6P09630 AL627231.1-201ENST00000394467 1125 ntBASIC16.9■□□□□ 0.3
HOXC6P09630 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.9■□□□□ 0.3
HOXC6P09630 TLE1P1-201ENST00000422965 589 ntBASIC16.9■□□□□ 0.3
HOXC6P09630 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXC6P09630 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HOXC6P09630 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.9■□□□□ 0.3
HOXC6P09630 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.9■□□□□ 0.3
HOXC6P09630 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
HOXC6P09630 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.9■□□□□ 0.3
HOXC6P09630 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.9■□□□□ 0.3
HOXC6P09630 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.9■□□□□ 0.3
HOXC6P09630 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 AC005962.1-201ENST00000584100 773 ntBASIC16.9■□□□□ 0.3
HOXC6P09630 AC103810.10-201ENST00000606504 343 ntBASIC16.9■□□□□ 0.3
HOXC6P09630 BX088702.1-201ENST00000610784 235 ntBASIC16.9■□□□□ 0.3
HOXC6P09630 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.9■□□□□ 0.3
HOXC6P09630 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.9■□□□□ 0.3
HOXC6P09630 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 KRT8P21-201ENST00000430398 1491 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms