Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HTR1AP08908 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.86□□□□□ -0.19
HTR1AP08908 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.86□□□□□ -0.19
HTR1AP08908 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.86□□□□□ -0.19
HTR1AP08908 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.86□□□□□ -0.19
HTR1AP08908 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
HTR1AP08908 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.86□□□□□ -0.19
HTR1AP08908 TFAMP1-201ENST00000412727 736 ntBASIC13.86□□□□□ -0.19
HTR1AP08908 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.86□□□□□ -0.19
HTR1AP08908 AC142381.1-201ENST00000426099 345 ntBASIC13.86□□□□□ -0.19
HTR1AP08908 AL450487.1-201ENST00000426799 995 ntBASIC13.86□□□□□ -0.19
HTR1AP08908 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.86□□□□□ -0.19
HTR1AP08908 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.86□□□□□ -0.19
HTR1AP08908 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.86□□□□□ -0.19
HTR1AP08908 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.86□□□□□ -0.19
HTR1AP08908 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.86□□□□□ -0.19
HTR1AP08908 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.86□□□□□ -0.19
HTR1AP08908 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.86□□□□□ -0.19
HTR1AP08908 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.86□□□□□ -0.19
HTR1AP08908 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.86□□□□□ -0.19
HTR1AP08908 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 AC004241.5-201ENST00000623870 2448 ntBASIC13.86□□□□□ -0.19
HTR1AP08908 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HTR1AP08908 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HTR1AP08908 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.86□□□□□ -0.19
HTR1AP08908 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HTR1AP08908 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.86□□□□□ -0.19
HTR1AP08908 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 FAM90A12P-201ENST00000519497 2375 ntBASIC13.86□□□□□ -0.19
HTR1AP08908 FAM90A24P-201ENST00000520792 2369 ntBASIC13.86□□□□□ -0.19
HTR1AP08908 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HTR1AP08908 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HTR1AP08908 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
HTR1AP08908 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.85□□□□□ -0.19
HTR1AP08908 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
HTR1AP08908 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.85□□□□□ -0.19
HTR1AP08908 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.85□□□□□ -0.19
HTR1AP08908 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.85□□□□□ -0.19
HTR1AP08908 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 HLA-H-201ENST00000383620 1096 ntBASIC13.85□□□□□ -0.19
HTR1AP08908 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.85□□□□□ -0.19
HTR1AP08908 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.85□□□□□ -0.19
HTR1AP08908 AL671277.1-201ENST00000429656 993 ntBASIC13.85□□□□□ -0.19
HTR1AP08908 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.85□□□□□ -0.19
HTR1AP08908 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.85□□□□□ -0.19
HTR1AP08908 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HTR1AP08908 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.85□□□□□ -0.19
HTR1AP08908 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.85□□□□□ -0.19
HTR1AP08908 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.85□□□□□ -0.19
HTR1AP08908 SLC25A6P4-201ENST00000586535 553 ntBASIC13.85□□□□□ -0.19
HTR1AP08908 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.85□□□□□ -0.19
HTR1AP08908 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.85□□□□□ -0.19
HTR1AP08908 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 AL513190.1-201ENST00000621254 727 ntBASIC13.85□□□□□ -0.19
HTR1AP08908 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.85□□□□□ -0.19
HTR1AP08908 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
HTR1AP08908 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
HTR1AP08908 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HTR1AP08908 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms