Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.28■□□□□ 0.04
RETP07949 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
RETP07949 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.28■□□□□ 0.04
RETP07949 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.28■□□□□ 0.04
RETP07949 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RETP07949 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RETP07949 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.28■□□□□ 0.04
RETP07949 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.27■□□□□ 0.04
RETP07949 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.27■□□□□ 0.04
RETP07949 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.27■□□□□ 0.04
RETP07949 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.27■□□□□ 0.04
RETP07949 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.27■□□□□ 0.04
RETP07949 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RETP07949 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RETP07949 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.27■□□□□ 0.04
RETP07949 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RETP07949 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RETP07949 AC008132.1-202ENST00000342005 1389 ntBASIC15.27■□□□□ 0.04
RETP07949 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.27■□□□□ 0.04
RETP07949 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.27■□□□□ 0.04
RETP07949 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RETP07949 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RETP07949 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RETP07949 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RETP07949 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RETP07949 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RETP07949 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RETP07949 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.27■□□□□ 0.04
RETP07949 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.27■□□□□ 0.04
RETP07949 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.27■□□□□ 0.04
RETP07949 AC022217.1-201ENST00000521069 738 ntBASIC15.27■□□□□ 0.04
RETP07949 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.27■□□□□ 0.04
RETP07949 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RETP07949 RN7SL555P-201ENST00000584742 339 ntBASIC15.27■□□□□ 0.04
RETP07949 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.27■□□□□ 0.04
RETP07949 AL645939.5-201ENST00000606834 243 ntBASIC15.27■□□□□ 0.04
RETP07949 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.27■□□□□ 0.04
RETP07949 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RETP07949 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RETP07949 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.27■□□□□ 0.03
RETP07949 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RETP07949 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RETP07949 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RETP07949 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RETP07949 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RETP07949 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.27■□□□□ 0.03
RETP07949 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RETP07949 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RETP07949 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RETP07949 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RETP07949 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RETP07949 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.26■□□□□ 0.03
RETP07949 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RETP07949 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
RETP07949 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.26■□□□□ 0.03
RETP07949 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RETP07949 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
RETP07949 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.26■□□□□ 0.03
RETP07949 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 AL136379.1-201ENST00000623471 2642 ntBASIC15.26■□□□□ 0.03
RETP07949 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RETP07949 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.26■□□□□ 0.03
RETP07949 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.26■□□□□ 0.03
RETP07949 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.26■□□□□ 0.03
RETP07949 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.26■□□□□ 0.03
RETP07949 FAM8A4P-201ENST00000435433 1213 ntBASIC15.26■□□□□ 0.03
RETP07949 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.26■□□□□ 0.03
RETP07949 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.26■□□□□ 0.03
RETP07949 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.26■□□□□ 0.03
RETP07949 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.26■□□□□ 0.03
RETP07949 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.26■□□□□ 0.03
RETP07949 AL161670.2-201ENST00000557650 1227 ntBASIC15.26■□□□□ 0.03
RETP07949 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RETP07949 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.26■□□□□ 0.03
RETP07949 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RETP07949 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RETP07949 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RETP07949 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RETP07949 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms