Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.27□□□□□ -0.13
PDGFAP04085 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.27□□□□□ -0.13
PDGFAP04085 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PDGFAP04085 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PDGFAP04085 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PDGFAP04085 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFAP04085 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFAP04085 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFAP04085 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.27□□□□□ -0.13
PDGFAP04085 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PDGFAP04085 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
PDGFAP04085 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
PDGFAP04085 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PDGFAP04085 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PDGFAP04085 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.27□□□□□ -0.13
PDGFAP04085 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PDGFAP04085 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFAP04085 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PDGFAP04085 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFAP04085 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.26□□□□□ -0.13
PDGFAP04085 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.26□□□□□ -0.13
PDGFAP04085 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.26□□□□□ -0.13
PDGFAP04085 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PDGFAP04085 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.26□□□□□ -0.13
PDGFAP04085 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.26□□□□□ -0.13
PDGFAP04085 AHCYP2-201ENST00000430630 1300 ntBASIC14.26□□□□□ -0.13
PDGFAP04085 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.26□□□□□ -0.13
PDGFAP04085 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PDGFAP04085 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
PDGFAP04085 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.26□□□□□ -0.13
PDGFAP04085 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PDGFAP04085 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.26□□□□□ -0.13
PDGFAP04085 RPSAP36-202ENST00000494591 1261 ntBASIC14.26□□□□□ -0.13
PDGFAP04085 GAPDHP40-201ENST00000505218 1006 ntBASIC14.26□□□□□ -0.13
PDGFAP04085 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.26□□□□□ -0.13
PDGFAP04085 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.26□□□□□ -0.13
PDGFAP04085 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.26□□□□□ -0.13
PDGFAP04085 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.26□□□□□ -0.13
PDGFAP04085 AP005019.2-201ENST00000615104 511 ntBASIC14.26□□□□□ -0.13
PDGFAP04085 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.26□□□□□ -0.13
PDGFAP04085 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.26□□□□□ -0.13
PDGFAP04085 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 AC067930.6-201ENST00000623257 4947 ntBASIC14.26□□□□□ -0.13
PDGFAP04085 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.26□□□□□ -0.13
PDGFAP04085 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.26□□□□□ -0.13
PDGFAP04085 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.26□□□□□ -0.13
PDGFAP04085 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PDGFAP04085 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.26□□□□□ -0.13
PDGFAP04085 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFAP04085 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PDGFAP04085 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PDGFAP04085 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.25□□□□□ -0.13
PDGFAP04085 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.25□□□□□ -0.13
PDGFAP04085 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PDGFAP04085 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PDGFAP04085 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PDGFAP04085 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.25□□□□□ -0.13
PDGFAP04085 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PDGFAP04085 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.25□□□□□ -0.13
PDGFAP04085 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PDGFAP04085 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFAP04085 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms