Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AL033527.5-201ENST00000641382 801 ntBASIC15.92■□□□□ 0.14
OPHN1O60890 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.92■□□□□ 0.14
OPHN1O60890 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
OPHN1O60890 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.92■□□□□ 0.14
OPHN1O60890 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
OPHN1O60890 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.92■□□□□ 0.14
OPHN1O60890 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
OPHN1O60890 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
OPHN1O60890 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
OPHN1O60890 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.92■□□□□ 0.14
OPHN1O60890 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.92■□□□□ 0.14
OPHN1O60890 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.92■□□□□ 0.14
OPHN1O60890 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.92■□□□□ 0.14
OPHN1O60890 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
OPHN1O60890 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.91■□□□□ 0.14
OPHN1O60890 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
OPHN1O60890 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.91■□□□□ 0.14
OPHN1O60890 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
OPHN1O60890 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.91■□□□□ 0.14
OPHN1O60890 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
OPHN1O60890 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.91■□□□□ 0.14
OPHN1O60890 TOMM22P5-201ENST00000416399 439 ntBASIC15.91■□□□□ 0.14
OPHN1O60890 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.91■□□□□ 0.14
OPHN1O60890 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.91■□□□□ 0.14
OPHN1O60890 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
OPHN1O60890 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.91■□□□□ 0.14
OPHN1O60890 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
OPHN1O60890 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.91■□□□□ 0.14
OPHN1O60890 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.91■□□□□ 0.14
OPHN1O60890 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
OPHN1O60890 AC008735.3-201ENST00000596646 500 ntBASIC15.91■□□□□ 0.14
OPHN1O60890 TMEM261P1-201ENST00000604899 340 ntBASIC15.91■□□□□ 0.14
OPHN1O60890 LINC01115-203ENST00000606068 577 ntBASIC15.91■□□□□ 0.14
OPHN1O60890 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.91■□□□□ 0.14
OPHN1O60890 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.91■□□□□ 0.14
OPHN1O60890 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.91■□□□□ 0.14
OPHN1O60890 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
OPHN1O60890 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
OPHN1O60890 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.91■□□□□ 0.14
OPHN1O60890 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
OPHN1O60890 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
OPHN1O60890 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
OPHN1O60890 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
OPHN1O60890 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.9■□□□□ 0.14
OPHN1O60890 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.9■□□□□ 0.14
OPHN1O60890 AC098850.1-201ENST00000419919 790 ntBASIC15.9■□□□□ 0.14
OPHN1O60890 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.9■□□□□ 0.14
OPHN1O60890 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.9■□□□□ 0.14
OPHN1O60890 AL589987.1-201ENST00000453380 819 ntBASIC15.9■□□□□ 0.14
OPHN1O60890 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.9■□□□□ 0.14
OPHN1O60890 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.9■□□□□ 0.14
OPHN1O60890 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 KRT18P43-201ENST00000469825 1281 ntBASIC15.9■□□□□ 0.14
OPHN1O60890 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.9■□□□□ 0.14
OPHN1O60890 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.9■□□□□ 0.14
OPHN1O60890 TIMM17BP1-201ENST00000545713 516 ntBASIC15.9■□□□□ 0.14
OPHN1O60890 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
OPHN1O60890 SNX29P1-201ENST00000548357 1007 ntBASIC15.9■□□□□ 0.14
OPHN1O60890 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.9■□□□□ 0.14
OPHN1O60890 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.9■□□□□ 0.14
OPHN1O60890 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.9■□□□□ 0.14
OPHN1O60890 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.9■□□□□ 0.14
OPHN1O60890 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.9■□□□□ 0.14
OPHN1O60890 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
OPHN1O60890 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 AC026748.1-201ENST00000624349 3251 ntBASIC15.9■□□□□ 0.14
OPHN1O60890 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.9■□□□□ 0.14
OPHN1O60890 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms