Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HCN1O60741 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
HCN1O60741 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.25□□□□□ -0.13
HCN1O60741 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HCN1O60741 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HCN1O60741 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 RPL5P21-201ENST00000404620 815 ntBASIC14.25□□□□□ -0.13
HCN1O60741 AC098850.1-201ENST00000419919 790 ntBASIC14.25□□□□□ -0.13
HCN1O60741 AL442647.2-201ENST00000429864 857 ntBASIC14.25□□□□□ -0.13
HCN1O60741 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.25□□□□□ -0.13
HCN1O60741 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.25□□□□□ -0.13
HCN1O60741 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.25□□□□□ -0.13
HCN1O60741 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.25□□□□□ -0.13
HCN1O60741 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.25□□□□□ -0.13
HCN1O60741 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.25□□□□□ -0.13
HCN1O60741 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.25□□□□□ -0.13
HCN1O60741 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.25□□□□□ -0.13
HCN1O60741 IGHV3-72-202ENST00000621503 303 ntBASIC14.25□□□□□ -0.13
HCN1O60741 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.25□□□□□ -0.13
HCN1O60741 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
HCN1O60741 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.25□□□□□ -0.13
HCN1O60741 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 LINC00552-201ENST00000625151 2579 ntBASIC14.25□□□□□ -0.13
HCN1O60741 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.24□□□□□ -0.13
HCN1O60741 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.24□□□□□ -0.13
HCN1O60741 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HCN1O60741 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HCN1O60741 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
HCN1O60741 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.24□□□□□ -0.13
HCN1O60741 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
HCN1O60741 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.24□□□□□ -0.13
HCN1O60741 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HCN1O60741 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.24□□□□□ -0.13
HCN1O60741 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.24□□□□□ -0.13
HCN1O60741 GPR53P-205ENST00000457298 1084 ntBASIC14.24□□□□□ -0.13
HCN1O60741 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.24□□□□□ -0.13
HCN1O60741 RPL13AP25-201ENST00000484130 612 ntBASIC14.24□□□□□ -0.13
HCN1O60741 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.24□□□□□ -0.13
HCN1O60741 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.24□□□□□ -0.13
HCN1O60741 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.24□□□□□ -0.13
HCN1O60741 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.24□□□□□ -0.13
HCN1O60741 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.24□□□□□ -0.13
HCN1O60741 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.24□□□□□ -0.13
HCN1O60741 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.24□□□□□ -0.13
HCN1O60741 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HCN1O60741 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.24□□□□□ -0.13
HCN1O60741 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HCN1O60741 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HCN1O60741 AL607033.1-201ENST00000623900 1599 ntBASIC14.24□□□□□ -0.13
HCN1O60741 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
HCN1O60741 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.24□□□□□ -0.13
HCN1O60741 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HCN1O60741 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.24□□□□□ -0.13
HCN1O60741 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HCN1O60741 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HCN1O60741 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCN1O60741 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HCN1O60741 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN1O60741 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms