Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAF3IP2O43734 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAF3IP2O43734 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF3IP2O43734 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF3IP2O43734 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAF3IP2O43734 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAF3IP2O43734 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAF3IP2O43734 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF3IP2O43734 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF3IP2O43734 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAF3IP2O43734 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF3IP2O43734 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF3IP2O43734 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAF3IP2O43734 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 CICP14-201ENST00000629111 2732 ntBASIC13.51□□□□□ -0.25
TRAF3IP2O43734 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 AC098614.1-201ENST00000368528 745 ntBASIC13.51□□□□□ -0.25
TRAF3IP2O43734 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 ACTBP8-201ENST00000403258 1108 ntBASIC13.51□□□□□ -0.25
TRAF3IP2O43734 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 AC093433.1-201ENST00000458048 571 ntBASIC13.51□□□□□ -0.25
TRAF3IP2O43734 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 AC022616.1-201ENST00000518688 554 ntBASIC13.51□□□□□ -0.25
TRAF3IP2O43734 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 AC009486.1-201ENST00000569860 813 ntBASIC13.51□□□□□ -0.25
TRAF3IP2O43734 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 AC023090.2-201ENST00000625182 2110 ntBASIC13.51□□□□□ -0.25
TRAF3IP2O43734 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 AC106881.1-201ENST00000605849 3329 ntBASIC13.51□□□□□ -0.25
TRAF3IP2O43734 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAF3IP2O43734 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 AL035633.1-201ENST00000406139 838 ntBASIC13.5□□□□□ -0.25
TRAF3IP2O43734 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 EIF3FP3-201ENST00000434851 1086 ntBASIC13.5□□□□□ -0.25
TRAF3IP2O43734 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.5□□□□□ -0.25
TRAF3IP2O43734 KRT18P25-201ENST00000508931 1278 ntBASIC13.5□□□□□ -0.25
TRAF3IP2O43734 MIR5189-201ENST00000577370 114 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms