Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ACTN4O43707 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17■□□□□ 0.31
ACTN4O43707 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
ACTN4O43707 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ACTN4O43707 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ACTN4O43707 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17■□□□□ 0.31
ACTN4O43707 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ACTN4O43707 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ACTN4O43707 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.99■□□□□ 0.31
ACTN4O43707 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.99■□□□□ 0.31
ACTN4O43707 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
ACTN4O43707 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ACTN4O43707 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
ACTN4O43707 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.99■□□□□ 0.31
ACTN4O43707 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ACTN4O43707 AL354702.1-201ENST00000442006 1960 ntBASIC16.99■□□□□ 0.31
ACTN4O43707 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.99■□□□□ 0.31
ACTN4O43707 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ACTN4O43707 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.99■□□□□ 0.31
ACTN4O43707 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.99■□□□□ 0.31
ACTN4O43707 AL139094.1-201ENST00000405549 1188 ntBASIC16.99■□□□□ 0.31
ACTN4O43707 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.99■□□□□ 0.31
ACTN4O43707 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ACTN4O43707 AC098850.1-201ENST00000419919 790 ntBASIC16.99■□□□□ 0.31
ACTN4O43707 CYMP-203ENST00000474680 1263 ntBASIC16.99■□□□□ 0.31
ACTN4O43707 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.99■□□□□ 0.31
ACTN4O43707 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC16.99■□□□□ 0.31
ACTN4O43707 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 AC007431.3-201ENST00000623221 587 ntBASIC16.99■□□□□ 0.31
ACTN4O43707 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ACTN4O43707 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
ACTN4O43707 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
ACTN4O43707 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.99■□□□□ 0.31
ACTN4O43707 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.99■□□□□ 0.31
ACTN4O43707 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ACTN4O43707 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.98■□□□□ 0.31
ACTN4O43707 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
ACTN4O43707 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ACTN4O43707 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ACTN4O43707 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ACTN4O43707 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ACTN4O43707 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 RNU1-114P-201ENST00000365297 166 ntBASIC16.98■□□□□ 0.31
ACTN4O43707 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ACTN4O43707 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.98■□□□□ 0.31
ACTN4O43707 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.98■□□□□ 0.31
ACTN4O43707 MTND2P7-201ENST00000521337 640 ntBASIC16.98■□□□□ 0.31
ACTN4O43707 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.98■□□□□ 0.31
ACTN4O43707 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.98■□□□□ 0.31
ACTN4O43707 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.98■□□□□ 0.31
ACTN4O43707 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
ACTN4O43707 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.98■□□□□ 0.31
ACTN4O43707 AC006213.4-201ENST00000616184 634 ntBASIC16.98■□□□□ 0.31
ACTN4O43707 BX539320.1-201ENST00000623759 877 ntBASIC16.98■□□□□ 0.31
ACTN4O43707 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ACTN4O43707 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.98■□□□□ 0.31
ACTN4O43707 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.98■□□□□ 0.31
ACTN4O43707 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ACTN4O43707 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ACTN4O43707 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.98■□□□□ 0.31
ACTN4O43707 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.98■□□□□ 0.31
ACTN4O43707 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ACTN4O43707 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ACTN4O43707 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ACTN4O43707 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.97■□□□□ 0.31
ACTN4O43707 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ACTN4O43707 KRT8P22-201ENST00000562317 1415 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 275.6 ms