Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RIPK2O43353 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RIPK2O43353 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RIPK2O43353 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RIPK2O43353 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RIPK2O43353 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.41■□□□□ 0.06
RIPK2O43353 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RIPK2O43353 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.41■□□□□ 0.06
RIPK2O43353 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RIPK2O43353 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RIPK2O43353 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RIPK2O43353 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RIPK2O43353 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.41■□□□□ 0.06
RIPK2O43353 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.41■□□□□ 0.06
RIPK2O43353 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.41■□□□□ 0.06
RIPK2O43353 KRT8P24-201ENST00000560290 1559 ntBASIC15.41■□□□□ 0.06
RIPK2O43353 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RIPK2O43353 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RIPK2O43353 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RIPK2O43353 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RIPK2O43353 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.4■□□□□ 0.06
RIPK2O43353 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
RIPK2O43353 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.4■□□□□ 0.06
RIPK2O43353 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.4■□□□□ 0.06
RIPK2O43353 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.4■□□□□ 0.06
RIPK2O43353 HTR5BP-201ENST00000430851 1154 ntBASIC15.4■□□□□ 0.06
RIPK2O43353 RBPMS2P1-201ENST00000437762 623 ntBASIC15.4■□□□□ 0.06
RIPK2O43353 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.4■□□□□ 0.06
RIPK2O43353 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RIPK2O43353 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RIPK2O43353 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.4■□□□□ 0.06
RIPK2O43353 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 AC093520.2-201ENST00000561830 333 ntBASIC15.4■□□□□ 0.06
RIPK2O43353 AC026150.2-201ENST00000564693 1156 ntBASIC15.4■□□□□ 0.06
RIPK2O43353 AC040169.1-201ENST00000565382 521 ntBASIC15.4■□□□□ 0.06
RIPK2O43353 AC074044.1-201ENST00000609673 707 ntBASIC15.4■□□□□ 0.06
RIPK2O43353 BX640515.1-201ENST00000617215 977 ntBASIC15.4■□□□□ 0.06
RIPK2O43353 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.4■□□□□ 0.06
RIPK2O43353 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RIPK2O43353 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 AC012617.1-204ENST00000586340 2305 ntBASIC15.4■□□□□ 0.06
RIPK2O43353 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.4■□□□□ 0.06
RIPK2O43353 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.4■□□□□ 0.06
RIPK2O43353 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.4■□□□□ 0.06
RIPK2O43353 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.4■□□□□ 0.06
RIPK2O43353 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.4■□□□□ 0.06
RIPK2O43353 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RIPK2O43353 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RIPK2O43353 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.39■□□□□ 0.05
RIPK2O43353 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RIPK2O43353 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
RIPK2O43353 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RIPK2O43353 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RIPK2O43353 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.39■□□□□ 0.05
RIPK2O43353 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.39■□□□□ 0.05
RIPK2O43353 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
RIPK2O43353 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.39■□□□□ 0.05
RIPK2O43353 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
RIPK2O43353 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RIPK2O43353 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 AL627223.1-201ENST00000416693 442 ntBASIC15.39■□□□□ 0.05
RIPK2O43353 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
RIPK2O43353 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.39■□□□□ 0.05
RIPK2O43353 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RIPK2O43353 SERBP1P3-201ENST00000459980 809 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms