Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.21□□□□□ -0.3
PHF1O43189 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
PHF1O43189 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PHF1O43189 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
PHF1O43189 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
PHF1O43189 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.21□□□□□ -0.3
PHF1O43189 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
PHF1O43189 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
PHF1O43189 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
PHF1O43189 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.2□□□□□ -0.3
PHF1O43189 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
PHF1O43189 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF1O43189 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF1O43189 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.2□□□□□ -0.3
PHF1O43189 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
PHF1O43189 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
PHF1O43189 REXO1L1P-202ENST00000608646 1974 ntBASIC13.2□□□□□ -0.3
PHF1O43189 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
PHF1O43189 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
PHF1O43189 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF1O43189 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
PHF1O43189 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
PHF1O43189 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.2□□□□□ -0.3
PHF1O43189 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF1O43189 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.2□□□□□ -0.3
PHF1O43189 CROCCP4-201ENST00000457096 498 ntBASIC13.2□□□□□ -0.3
PHF1O43189 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.2□□□□□ -0.3
PHF1O43189 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF1O43189 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
PHF1O43189 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF1O43189 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
PHF1O43189 TPRX2P-201ENST00000535362 881 ntBASIC13.2□□□□□ -0.3
PHF1O43189 TIMM17BP1-201ENST00000545713 516 ntBASIC13.2□□□□□ -0.3
PHF1O43189 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
PHF1O43189 CTBP2P3-201ENST00000585629 1255 ntBASIC13.2□□□□□ -0.3
PHF1O43189 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
PHF1O43189 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
PHF1O43189 AC074044.1-201ENST00000609673 707 ntBASIC13.2□□□□□ -0.3
PHF1O43189 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
PHF1O43189 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF1O43189 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 AC009090.5-201ENST00000624886 2285 ntBASIC13.2□□□□□ -0.3
PHF1O43189 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF1O43189 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.2□□□□□ -0.3
PHF1O43189 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.2□□□□□ -0.3
PHF1O43189 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF1O43189 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF1O43189 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
PHF1O43189 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.2□□□□□ -0.3
PHF1O43189 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PHF1O43189 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
PHF1O43189 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.19□□□□□ -0.3
PHF1O43189 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
PHF1O43189 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 AC018892.3-201ENST00000623986 2499 ntBASIC13.19□□□□□ -0.3
PHF1O43189 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.19□□□□□ -0.3
PHF1O43189 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.19□□□□□ -0.3
PHF1O43189 AC005089.1-201ENST00000619486 2241 ntBASIC13.19□□□□□ -0.3
PHF1O43189 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
PHF1O43189 ANKRD19P-201ENST00000338192 862 ntBASIC13.19□□□□□ -0.3
PHF1O43189 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.19□□□□□ -0.3
PHF1O43189 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.19□□□□□ -0.3
PHF1O43189 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.19□□□□□ -0.3
PHF1O43189 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms