Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
MID1O15344 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.14■□□□□ 0.01
MID1O15344 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MID1O15344 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.14■□□□□ 0.01
MID1O15344 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.14■□□□□ 0.01
MID1O15344 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 AL136309.1-201ENST00000403917 691 ntBASIC15.14■□□□□ 0.01
MID1O15344 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.14■□□□□ 0.01
MID1O15344 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.14■□□□□ 0.01
MID1O15344 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
MID1O15344 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.14■□□□□ 0.01
MID1O15344 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.14■□□□□ 0.01
MID1O15344 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.14■□□□□ 0.01
MID1O15344 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.14■□□□□ 0.01
MID1O15344 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.14■□□□□ 0.01
MID1O15344 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.14■□□□□ 0.01
MID1O15344 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.14■□□□□ 0.01
MID1O15344 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.14■□□□□ 0.01
MID1O15344 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
MID1O15344 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
MID1O15344 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.14■□□□□ 0.01
MID1O15344 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
MID1O15344 C18orf15-201ENST00000623680 2534 ntBASIC15.14■□□□□ 0.01
MID1O15344 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
MID1O15344 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.14■□□□□ 0.01
MID1O15344 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MID1O15344 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.14■□□□□ 0.01
MID1O15344 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
MID1O15344 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.13■□□□□ 0.01
MID1O15344 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MID1O15344 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MID1O15344 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MID1O15344 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.13■□□□□ 0.01
MID1O15344 AC112693.3-201ENST00000624819 1983 ntBASIC15.13■□□□□ 0.01
MID1O15344 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MID1O15344 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.13■□□□□ 0.01
MID1O15344 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MID1O15344 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MID1O15344 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
MID1O15344 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MID1O15344 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MID1O15344 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MID1O15344 AC004945.1-201ENST00000416738 983 ntBASIC15.13■□□□□ 0.01
MID1O15344 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MID1O15344 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
MID1O15344 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.13■□□□□ 0.01
MID1O15344 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.13■□□□□ 0.01
MID1O15344 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.13■□□□□ 0.01
MID1O15344 AC100850.1-201ENST00000506768 649 ntBASIC15.13■□□□□ 0.01
MID1O15344 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MID1O15344 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.13■□□□□ 0.01
MID1O15344 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MID1O15344 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.13■□□□□ 0.01
MID1O15344 MIR4683-201ENST00000579659 81 ntBASIC15.13■□□□□ 0.01
MID1O15344 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.13■□□□□ 0.01
MID1O15344 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.13■□□□□ 0.01
MID1O15344 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
MID1O15344 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
MID1O15344 AC244452.3-201ENST00000636814 210 ntBASIC15.13■□□□□ 0.01
MID1O15344 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MID1O15344 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MID1O15344 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.13■□□□□ 0.01
MID1O15344 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MID1O15344 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MID1O15344 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MID1O15344 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.13■□□□□ 0.01
MID1O15344 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
MID1O15344 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MID1O15344 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MID1O15344 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MID1O15344 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MID1O15344 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MID1O15344 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MID1O15344 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.12■□□□□ 0.01
MID1O15344 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MID1O15344 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.12■□□□□ 0.01
MID1O15344 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.12■□□□□ 0.01
MID1O15344 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms