Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHD1O14646 GGTLC4P-201ENST00000402176 664 ntBASIC23.51■■□□□ 1.35
CHD1O14646 FAM197Y6-201ENST00000420524 766 ntBASIC23.51■■□□□ 1.35
CHD1O14646 TREX1-203ENST00000456089 629 ntTSL 3 BASIC23.51■■□□□ 1.35
CHD1O14646 RN7SL128P-201ENST00000467883 305 ntBASIC23.51■■□□□ 1.35
CHD1O14646 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHD1O14646 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC23.51■■□□□ 1.35
CHD1O14646 AC090820.1-201ENST00000519722 591 ntBASIC23.51■■□□□ 1.35
CHD1O14646 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC23.51■■□□□ 1.35
CHD1O14646 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHD1O14646 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC23.51■■□□□ 1.35
CHD1O14646 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC23.51■■□□□ 1.35
CHD1O14646 AC090386.2-201ENST00000623010 1039 ntBASIC23.51■■□□□ 1.35
CHD1O14646 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CHD1O14646 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC23.51■■□□□ 1.35
CHD1O14646 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHD1O14646 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHD1O14646 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHD1O14646 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHD1O14646 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC23.51■■□□□ 1.35
CHD1O14646 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC23.51■■□□□ 1.35
CHD1O14646 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC23.51■■□□□ 1.35
CHD1O14646 AL050341.2-201ENST00000567508 1541 ntBASIC23.51■■□□□ 1.35
CHD1O14646 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC23.51■■□□□ 1.35
CHD1O14646 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC23.51■■□□□ 1.35
CHD1O14646 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHD1O14646 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1O14646 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1O14646 JPT2-203ENST00000382711 894 ntTSL 4 BASIC23.5■■□□□ 1.35
CHD1O14646 GRPEL2P1-201ENST00000453145 339 ntBASIC23.5■■□□□ 1.35
CHD1O14646 AP005264.5-201ENST00000590066 467 ntBASIC23.5■■□□□ 1.35
CHD1O14646 BX322534.1-201ENST00000635574 241 ntBASIC23.5■■□□□ 1.35
CHD1O14646 AC215524.1-201ENST00000635696 241 ntBASIC23.5■■□□□ 1.35
CHD1O14646 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD1O14646 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD1O14646 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC23.5■■□□□ 1.35
CHD1O14646 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1O14646 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1O14646 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1O14646 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC23.5■■□□□ 1.35
CHD1O14646 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1O14646 SAT1-201ENST00000379251 801 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD1O14646 SAT1-202ENST00000379253 909 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD1O14646 SAT1-203ENST00000379254 868 ntTSL 3 BASIC23.5■■□□□ 1.35
CHD1O14646 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1O14646 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CHD1O14646 NME2-201ENST00000393183 568 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD1O14646 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1O14646 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1O14646 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD1O14646 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC23.5■■□□□ 1.35
CHD1O14646 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD1O14646 URB1-AS1-201ENST00000534991 831 ntBASIC23.5■■□□□ 1.35
CHD1O14646 MIR4746-201ENST00000579802 71 ntBASIC23.5■■□□□ 1.35
CHD1O14646 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC23.5■■□□□ 1.35
CHD1O14646 AC245369.7-201ENST00000631386 350 ntBASIC23.5■■□□□ 1.35
CHD1O14646 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1O14646 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1O14646 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1O14646 FRMD6-AS1-201ENST00000617151 2229 ntBASIC23.49■■□□□ 1.35
CHD1O14646 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1O14646 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1O14646 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
CHD1O14646 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC23.49■■□□□ 1.35
CHD1O14646 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1O14646 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1O14646 AC007952.5-201ENST00000572818 1486 ntBASIC23.49■■□□□ 1.35
CHD1O14646 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1O14646 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
CHD1O14646 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
CHD1O14646 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC23.49■■□□□ 1.35
CHD1O14646 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
CHD1O14646 HNRNPA1P25-201ENST00000422644 937 ntBASIC23.49■■□□□ 1.35
CHD1O14646 ASS1P2-201ENST00000439895 1223 ntBASIC23.49■■□□□ 1.35
CHD1O14646 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1O14646 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC23.49■■□□□ 1.35
CHD1O14646 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
CHD1O14646 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC23.49■■□□□ 1.35
CHD1O14646 GAS7-216ENST00000583882 553 ntTSL 5 BASIC23.49■■□□□ 1.35
CHD1O14646 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
CHD1O14646 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1O14646 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
CHD1O14646 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC23.49■■□□□ 1.35
CHD1O14646 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC23.49■■□□□ 1.35
CHD1O14646 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC23.48■■□□□ 1.35
CHD1O14646 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1O14646 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC23.48■■□□□ 1.35
CHD1O14646 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.48■■□□□ 1.35
CHD1O14646 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
CHD1O14646 RN7SL788P-201ENST00000460504 316 ntBASIC23.48■■□□□ 1.35
CHD1O14646 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC23.48■■□□□ 1.35
CHD1O14646 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC23.48■■□□□ 1.35
CHD1O14646 AL136982.5-201ENST00000605222 294 ntBASIC23.48■■□□□ 1.35
CHD1O14646 AC139713.2-207ENST00000641556 1292 ntBASIC23.48■■□□□ 1.35
CHD1O14646 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1O14646 ACE-203ENST00000413513 2237 ntTSL 2 BASIC23.48■■□□□ 1.35
CHD1O14646 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1O14646 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1O14646 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC23.48■■□□□ 1.35
CHD1O14646 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms