Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 ENPP7P5-201ENST00000541031 1031 ntBASIC16.21■□□□□ 0.19
FOXN3O00409 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.21■□□□□ 0.19
FOXN3O00409 CLUHP6-201ENST00000580789 941 ntBASIC16.21■□□□□ 0.19
FOXN3O00409 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
FOXN3O00409 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.21■□□□□ 0.19
FOXN3O00409 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 NFIC-211ENST00000641145 8399 ntBASIC16.21■□□□□ 0.19
FOXN3O00409 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXN3O00409 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
FOXN3O00409 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
FOXN3O00409 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXN3O00409 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.21■□□□□ 0.19
FOXN3O00409 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
FOXN3O00409 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
FOXN3O00409 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
FOXN3O00409 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FOXN3O00409 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.21■□□□□ 0.18
FOXN3O00409 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
FOXN3O00409 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXN3O00409 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
FOXN3O00409 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXN3O00409 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXN3O00409 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
FOXN3O00409 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.2■□□□□ 0.18
FOXN3O00409 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXN3O00409 EIF3FP3-201ENST00000434851 1086 ntBASIC16.2■□□□□ 0.18
FOXN3O00409 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXN3O00409 AC026434.2-201ENST00000506094 1078 ntBASIC16.2■□□□□ 0.18
FOXN3O00409 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.2■□□□□ 0.18
FOXN3O00409 AC022616.1-201ENST00000518688 554 ntBASIC16.2■□□□□ 0.18
FOXN3O00409 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXN3O00409 AC190387.1-201ENST00000551683 408 ntBASIC16.2■□□□□ 0.18
FOXN3O00409 WASH4P-201ENST00000564273 1246 ntBASIC16.2■□□□□ 0.18
FOXN3O00409 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXN3O00409 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXN3O00409 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 AP005019.2-201ENST00000615104 511 ntBASIC16.2■□□□□ 0.18
FOXN3O00409 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.2■□□□□ 0.18
FOXN3O00409 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.2■□□□□ 0.18
FOXN3O00409 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
FOXN3O00409 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXN3O00409 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
FOXN3O00409 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
FOXN3O00409 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
FOXN3O00409 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
FOXN3O00409 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
FOXN3O00409 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXN3O00409 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXN3O00409 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
FOXN3O00409 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
FOXN3O00409 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXN3O00409 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXN3O00409 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXN3O00409 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
FOXN3O00409 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXN3O00409 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXN3O00409 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
FOXN3O00409 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXN3O00409 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 ACKR1-201ENST00000368121 1240 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms