Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 AL589987.1-201ENST00000453380 819 ntBASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 RARRES2P5-201ENST00000564013 466 ntBASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 AL391069.4-201ENST00000609583 481 ntBASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 AJ011932.1-201ENST00000621707 465 ntBASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 GHSR-202ENST00000427970 912 ntBASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 AC093004.1-201ENST00000508850 424 ntBASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 RRP7BP-205ENST00000566851 833 ntBASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 AC011467.4-201ENST00000594891 528 ntBASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms