Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC138749.3-201ENST00000567691 622 ntBASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 AC116165.1-201ENST00000611806 668 ntBASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 AC009118.2-201ENST00000613275 655 ntBASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA11Q9Y5H2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 HNRNPA1P23-201ENST00000491091 1133 ntBASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 AC093004.1-201ENST00000508850 424 ntBASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 AC026410.3-201ENST00000514280 936 ntBASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 AL049840.4-201ENST00000602422 811 ntBASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 AC007787.1-201ENST00000588095 1583 ntBASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA11Q9Y5H2 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDHGA11Q9Y5H2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms