Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 AL160314.3-201ENST00000556041 767 ntBASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 RN7SL774P-201ENST00000577467 290 ntBASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPO2Q9UMS6 AC009093.10-201ENST00000641956 1442 ntBASIC17.21■□□□□ 0.34
SYNPO2Q9UMS6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
SYNPO2Q9UMS6 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SYNPO2Q9UMS6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 CYP46A4P-201ENST00000414953 267 ntBASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 AC078875.1-201ENST00000431907 724 ntBASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 SPTLC1P5-201ENST00000450718 252 ntBASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 IGHJ2P-201ENST00000454480 60 ntBASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 AL161670.2-201ENST00000557650 1227 ntBASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNPO2Q9UMS6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms