Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 MIR1202-201ENST00000408529 83 ntBASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 AC025181.2-201ENST00000606994 802 ntBASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 CICP23-201ENST00000605013 2741 ntBASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 KLF2P2-201ENST00000416807 1039 ntBASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 AC006033.1-201ENST00000440505 426 ntBASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 RNA5SP486-201ENST00000515961 83 ntBASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 MIR4741-201ENST00000579822 90 ntBASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HDAC6Q9UBN7 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
HDAC6Q9UBN7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.14■□□□□ 0.34
HDAC6Q9UBN7 C18orf15-201ENST00000623680 2534 ntBASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms