Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CISHQ9NSE2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CISHQ9NSE2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CISHQ9NSE2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CISHQ9NSE2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CISHQ9NSE2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CISHQ9NSE2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CISHQ9NSE2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CISHQ9NSE2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CISHQ9NSE2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 AC025279.2-201ENST00000569730 653 ntBASIC16.14■□□□□ 0.17
CISHQ9NSE2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.14■□□□□ 0.17
CISHQ9NSE2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CISHQ9NSE2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CISHQ9NSE2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CISHQ9NSE2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CISHQ9NSE2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 CICP14-201ENST00000629111 2732 ntBASIC16.14■□□□□ 0.17
CISHQ9NSE2 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CISHQ9NSE2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CISHQ9NSE2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.14■□□□□ 0.17
CISHQ9NSE2 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 AC018529.2-202ENST00000611482 3087 ntBASIC16.13■□□□□ 0.17
CISHQ9NSE2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 FO681548.1-201ENST00000455617 1132 ntBASIC16.13■□□□□ 0.17
CISHQ9NSE2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 AC063926.3-201ENST00000624734 5658 ntBASIC16.13■□□□□ 0.17
CISHQ9NSE2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CISHQ9NSE2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CISHQ9NSE2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.12■□□□□ 0.17
CISHQ9NSE2 AC018442.1-201ENST00000421439 2061 ntBASIC16.12■□□□□ 0.17
CISHQ9NSE2 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CISHQ9NSE2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.12■□□□□ 0.17
CISHQ9NSE2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CISHQ9NSE2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CISHQ9NSE2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CISHQ9NSE2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.12■□□□□ 0.17
CISHQ9NSE2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms