Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 SERPINA13P-202ENST00000478994 924 ntBASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 AC022616.1-201ENST00000518688 554 ntBASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 FGD5P1-202ENST00000614866 2498 ntBASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 LINC01101-201ENST00000622953 1884 ntBASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 KRT18P36-201ENST00000411618 1276 ntBASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 KRT8P13-201ENST00000463294 1010 ntBASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 AC103988.2-201ENST00000561804 725 ntBASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 AL021578.1-201ENST00000613646 709 ntBASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 AP000593.2-201ENST00000542775 1433 ntBASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KIAA1549Q9HCM3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 HIST2H2BC-201ENST00000498492 580 ntBASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 AC023310.1-201ENST00000554836 735 ntBASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 AC132192.2-201ENST00000596206 1147 ntBASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 AL022328.3-201ENST00000607943 679 ntBASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 FAM45BP-202ENST00000592932 1624 ntBASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 AC015818.8-201ENST00000587907 1519 ntBASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.36□□□□□ -0.27
KIAA1549Q9HCM3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms